RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 C6orf50Q9HD87 102 aa27.84■■■□□ 2.05
TNFRSF4-203ENST00000497869 BTBD7Q9P203 1132 aa27.84■■■□□ 2.05
TNFRSF4-203ENST00000497869 CCPG1Q9ULG6 757 aa27.84■■■□□ 2.05
TNFRSF4-203ENST00000497869 CNPY2Q9Y2B0 182 aa27.84■■■□□ 2.05
TNFRSF4-203ENST00000497869 ZBED4O75132 1171 aa27.83■■■□□ 2.05
TNFRSF4-203ENST00000497869 ADCY7P51828 1080 aa27.83■■■□□ 2.05
TNFRSF4-203ENST00000497869 LBX2Q6XYB7 198 aa27.83■■■□□ 2.05
TNFRSF4-203ENST00000497869 CLEC4DQ8WXI8 215 aa27.83■■■□□ 2.05
TNFRSF4-203ENST00000497869 TFIP11Q9UBB9 837 aaKnown RBP27.83■■■□□ 2.05
TNFRSF4-203ENST00000497869 MEIS2O14770 477 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 CNMDO75829 334 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 CLK2P49760 499 aaKnown RBP27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 HERVK_113P62684 666 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 GALNT17Q6IS24 598 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 USP17L6PQ6QN14 398 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 BRAPQ7Z569 592 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 ZIC5Q96T25 663 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 PSTPIP2Q9H939 334 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 GDPD2Q9HCC8 539 aa27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 BIN2Q9UBW5 565 aaPredicted RBP27.82■■■□□ 2.04
TNFRSF4-203ENST00000497869 TESPA1A2RU30 521 aaPredicted RBP27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 CYP2C8P10632 490 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 NBR1Q14596 966 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 USP28Q96RU2 1077 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 TXNRD2Q9NNW7 524 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 GNA11P29992 359 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 IRX3P78415 501 aaPredicted RBP27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 GNL2Q13823 731 aaKnown RBP27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 MUM1L1Q5H9M0 696 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 PIK3AP1Q6ZUJ8 805 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 PGBD1Q96JS3 809 aa27.81■■■□□ 2.04
TNFRSF4-203ENST00000497869 PDHXO00330 501 aa27.8■■■□□ 2.04
TNFRSF4-203ENST00000497869 FDX1P10109 184 aa27.8■■■□□ 2.04
TNFRSF4-203ENST00000497869 JAKMIP3Q5VZ66 844 aa27.8■■■□□ 2.04
TNFRSF4-203ENST00000497869 R3HDMLQ9H3Y0 253 aa27.8■■■□□ 2.04
TNFRSF4-203ENST00000497869 NFIBO00712 420 aa27.79■■■□□ 2.04
TNFRSF4-203ENST00000497869 ATP2A1O14983 1001 aa27.79■■■□□ 2.04
TNFRSF4-203ENST00000497869 EDIL3O43854 480 aa27.79■■■□□ 2.04
TNFRSF4-203ENST00000497869 ANKRD23Q86SG2 305 aa27.79■■■□□ 2.04
TNFRSF4-203ENST00000497869 BRMS1Q9HCU9 246 aa27.79■■■□□ 2.04
TNFRSF4-203ENST00000497869 RBPJLQ9UBG7 517 aa27.79■■■□□ 2.04
TNFRSF4-203ENST00000497869 IGF2BP3O00425 579 aaKnown RBP eCLIP27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 ALAS1P13196 640 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 REXO1Q8N1G1 1221 aaKnown RBP27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 CUL5Q93034 780 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 HOMER2Q9NSB8 354 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 ATP6V1DQ9Y5K8 247 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 ABCB11O95342 1321 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 A0A0G2JMZ2 1700 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 HOXA13P31271 388 aaPredicted RBP27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 OAZ1P54368 228 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 SNRNP48Q6IEG0 339 aaKnown RBP27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 HHIPL1Q96JK4 782 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 CLIC4Q9Y696 253 aa27.78■■■□□ 2.04
TNFRSF4-203ENST00000497869 OSBPP22059 807 aa27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 MRPL12P52815 198 aaKnown RBP27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 CEBPZQ03701 1054 aaKnown RBP27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 CYP4F22Q6NT55 531 aa27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 SLC45A1Q9Y2W3 748 aa27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 MRPL11Q9Y3B7 192 aaKnown RBP27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 COL11A1P12107 1806 aaPredicted RBP27.77■■■□□ 2.04
TNFRSF4-203ENST00000497869 Q3C1V9 767 aa27.76■■■□□ 2.03
TNFRSF4-203ENST00000497869 MCM4P33991 863 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 STAT3P40763 770 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 PABPC4Q13310 644 aaKnown RBP eCLIP27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 TEX13BQ9BXU2 312 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 CTDP1Q9Y5B0 961 aaPredicted RBP27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 NCLP19338 710 aaKnown RBP27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 APLP1P51693 650 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 PLS1Q14651 629 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 NFKBIBQ15653 356 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 INF2Q27J81 1249 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 BICD2Q8TD16 824 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 TRERF1Q96PN7 1200 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 PAGR1Q9BTK6 254 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 PCDHB6Q9Y5E3 794 aa27.75■■■□□ 2.03
TNFRSF4-203ENST00000497869 PIK3CDO00329 1044 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 FIBPO43427 364 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 ATP2B1P20020 1258 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 CCDC102AQ96A19 550 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 GBP4Q96PP9 640 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 RNF146Q9NTX7 359 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 COL20A1Q9P218 1284 aa27.74■■■□□ 2.03
TNFRSF4-203ENST00000497869 MANSC4A6NHS7 340 aaPredicted RBP27.73■■■□□ 2.03
TNFRSF4-203ENST00000497869 CFBP00751 764 aa27.73■■■□□ 2.03
TNFRSF4-203ENST00000497869 TRAF1Q13077 416 aa27.73■■■□□ 2.03
TNFRSF4-203ENST00000497869 MB21D1Q8N884 522 aa27.73■■■□□ 2.03
TNFRSF4-203ENST00000497869 CREBZFQ9NS37 354 aa27.73■■■□□ 2.03
TNFRSF4-203ENST00000497869 CCDC194A0A1B0GVG4 234 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 KRT85P78386 507 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 GHRHRQ02643 423 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 GRM1Q13255 1194 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 KRT25Q7Z3Z0 450 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 SPATC1LQ9H0A9 340 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 RTEL1Q9NZ71 1219 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 HSD17B4P51659 736 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 PTPAQ15257 358 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 RILPL1Q5EBL4 403 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 TBCKQ8TEA7 893 aa27.72■■■□□ 2.03
TNFRSF4-203ENST00000497869 LEO1Q8WVC0 666 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms