RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 JMJD4Q9H9V9 463 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 CNPY2Q9Y2B0 182 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 NFIBO00712 420 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 SGPL1O95470 568 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 CAPN2P17655 700 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
MRPL55-234ENST00000497758 CCND3P30281 292 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-234ENST00000497758 GNAQP50148 359 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
MRPL55-234ENST00000497758 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-234ENST00000497758 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 MICU3Q86XE3 530 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 MSL3Q8N5Y2 521 aaKnown RBP13.64□□□□□ -0.23
MRPL55-234ENST00000497758 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-234ENST00000497758 ABCB11O95342 1321 aa13.64□□□□□ -0.23
MRPL55-234ENST00000497758 RBBP6Q7Z6E9 1792 aaKnown RBP13.63□□□□□ -0.23
MRPL55-234ENST00000497758 ZBTB5O15062 677 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 MSCO60682 206 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 CYBAP13498 195 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 RXRAP19793 462 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 CNTN2Q02246 1040 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 TRAF1Q13077 416 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 RNF207Q6ZRF8 634 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 AMNQ9BXJ7 453 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
MRPL55-234ENST00000497758 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
MRPL55-234ENST00000497758 ZBTB43O43298 467 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 IGHA2P01877 340 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 CPA1P15085 419 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 CALML3P27482 149 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 BAATQ14032 418 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 PRAMEF19Q5SWL8 479 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 APOA5Q6Q788 366 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 FANCBQ8NB91 859 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 TRPV1Q8NER1 839 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 PIGSQ96S52 555 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 SEC63Q9UGP8 760 aaKnown RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 CYP46A1Q9Y6A2 500 aa13.62□□□□□ -0.23
MRPL55-234ENST00000497758 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
MRPL55-234ENST00000497758 PNMA6FA0A0J9YX94 578 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 ASB14A6NK59 587 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 SEPT4O43236 478 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 RPS6P62753 249 aaKnown RBP13.61□□□□□ -0.23
MRPL55-234ENST00000497758 RTN1Q16799 776 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 MAMDC4Q6UXC1 1216 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 SLC30A10Q6XR72 485 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 Q6ZUG5 572 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 MTMR8Q96EF0 704 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 MPHOSPH6Q99547 160 aaKnown RBP13.61□□□□□ -0.23
MRPL55-234ENST00000497758 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 RBM28Q9NW13 759 aaKnown RBP13.61□□□□□ -0.23
MRPL55-234ENST00000497758 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-234ENST00000497758 ZHX1Q9UKY1 873 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-234ENST00000497758 PCDHA1Q9Y5I3 950 aa13.61□□□□□ -0.23
MRPL55-234ENST00000497758 SOWAHBA6NEL2 793 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 CYTH3O43739 400 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 SLC35G1Q2M3R5 365 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 BRF1Q92994 677 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 FGD4Q96M96 766 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 MAF1Q9H063 256 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 PLXNA1Q9UIW2 1896 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 BRPF3Q9ULD4 1205 aa13.6□□□□□ -0.23
MRPL55-234ENST00000497758 TNRC18O15417 2968 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-234ENST00000497758 B4DLN1 442 aa13.59□□□□□ -0.23
MRPL55-234ENST00000497758 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-234ENST00000497758 SNAI1O95863 264 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-234ENST00000497758 RARBP10826 455 aa13.59□□□□□ -0.23
MRPL55-234ENST00000497758 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms