RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
PSPC1-205ENST00000497722 CXorf38Q8TB03 319 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 PANK1Q8TE04 598 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 KLHL6Q8WZ60 621 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 DACT3Q96B18 629 aaPredicted RBP5.32□□□□□ -1.56
PSPC1-205ENST00000497722 SIGLEC10Q96LC7 697 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 HAUS7Q99871 368 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 MCMBPQ9BTE3 642 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 SUSD2Q9UGT4 822 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.32□□□□□ -1.56
PSPC1-205ENST00000497722 KCTD3Q9Y597 815 aa5.32□□□□□ -1.56
PSPC1-205ENST00000497722 IRS2Q9Y4H2 1338 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 MPOP05164 745 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 ADRB1P08588 477 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 RANGAP1P46060 587 aaPredicted RBP5.31□□□□□ -1.56
PSPC1-205ENST00000497722 CASP7P55210 303 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 EIF6P56537 245 aaKnown RBP5.31□□□□□ -1.56
PSPC1-205ENST00000497722 CYP4F8P98187 520 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 ERICH6BQ5W0A0 696 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 HLA-DQA1Q5Y7H0 255 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 IGDCC3Q8IVU1 814 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 NUP43Q8NFH3 380 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 NLGN2Q8NFZ4 835 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 OR6P1Q8NGX9 317 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 PHAXQ9H814 394 aaKnown RBP5.31□□□□□ -1.56
PSPC1-205ENST00000497722 FAM86C1Q9NVL1 165 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 CNOT6Q9ULM6 557 aaKnown RBP5.31□□□□□ -1.56
PSPC1-205ENST00000497722 DIS3Q9Y2L1 958 aaKnown RBP5.31□□□□□ -1.56
PSPC1-205ENST00000497722 PCDHA5Q9Y5H7 936 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
PSPC1-205ENST00000497722 ITGA4P13612 1032 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 IFNGR1P15260 489 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 FBLN1P23142 703 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 ARL4AP40617 200 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 ZNF385BQ569K4 471 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 NOL9Q5SY16 702 aaKnown RBP5.3□□□□□ -1.56
PSPC1-205ENST00000497722 C9orf131Q5VYM1 1079 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 CWF19L1Q69YN2 538 aaKnown RBP5.3□□□□□ -1.56
PSPC1-205ENST00000497722 CYP2R1Q6VVX0 501 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 RPTNQ6XPR3 784 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 LDHDQ86WU2 507 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 MZB1Q8WU39 189 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 PTCHD1Q96NR3 888 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 KCNC2Q96PR1 638 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 NOL6Q9H6R4 1146 aaKnown RBP5.3□□□□□ -1.56
PSPC1-205ENST00000497722 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 WHRNQ9P202 907 aa5.3□□□□□ -1.56
PSPC1-205ENST00000497722 SF3B6Q9Y3B4 125 aaKnown RBP5.3□□□□□ -1.56
PSPC1-205ENST00000497722 ADAMTS20P59510 1910 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 SRGAP3O43295 1099 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 PI3P19957 117 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 IGFBP6P24592 240 aaPredicted RBP5.29□□□□□ -1.56
PSPC1-205ENST00000497722 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
PSPC1-205ENST00000497722 CORO7P57737 925 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 NFKB2Q00653 900 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 SKOR2Q2VWA4 1001 aaPredicted RBP5.29□□□□□ -1.56
PSPC1-205ENST00000497722 RCSD1Q6JBY9 416 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 ARHGEF39Q8N4T4 335 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 FAM169BQ8N8A8 192 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 SEC16BQ96JE7 1060 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 CRBNQ96SW2 442 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 PCDHB10Q9UN67 800 aa5.29□□□□□ -1.56
PSPC1-205ENST00000497722 AURKAO14965 403 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 TRIM13O60858 407 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 EPHX1P07099 455 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 MAPKAPK2P49137 400 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 NASPP49321 788 aaPredicted RBP5.28□□□□□ -1.56
PSPC1-205ENST00000497722 SLC7A5Q01650 507 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 POU4F1Q01851 419 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 RAB3GAP1Q15042 981 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 TCEAL1Q15170 157 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 GNPTABQ3T906 1256 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 PLEKHN1Q494U1 663 aaPredicted RBP5.28□□□□□ -1.56
PSPC1-205ENST00000497722 OLFML2BQ68BL8 750 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 TMC6Q7Z403 805 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 FAM129CQ86XR2 697 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 MARCH10Q8NA82 808 aaPredicted RBP5.28□□□□□ -1.56
PSPC1-205ENST00000497722 RCC1LQ96I51 464 aaKnown RBP5.28□□□□□ -1.56
PSPC1-205ENST00000497722 ZDHHC15Q96MV8 337 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 TGIF2Q9GZN2 237 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 PDLIM7Q9NR12 457 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 IRAK3Q9Y616 596 aa5.28□□□□□ -1.56
PSPC1-205ENST00000497722 NUDT19A8MXV4 375 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 CD3EP07766 207 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 CELA3BP08861 270 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 DBHP09172 617 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 TMEM62Q0P6H9 643 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 NR1I3Q14994 352 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 TCERG1LQ5VWI1 586 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 NAT16Q8N8M0 369 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 ACBD3Q9H3P7 528 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 CGGBP1Q9UFW8 167 aaPredicted RBP5.27□□□□□ -1.57
PSPC1-205ENST00000497722 PLA2G2DQ9UNK4 145 aa5.27□□□□□ -1.57
PSPC1-205ENST00000497722 RFXAPO00287 272 aa5.26□□□□□ -1.57
PSPC1-205ENST00000497722 PPP1R11O60927 126 aaPredicted RBP5.26□□□□□ -1.57
PSPC1-205ENST00000497722 CYBBP04839 570 aa5.26□□□□□ -1.57
PSPC1-205ENST00000497722 TCF3P15923 654 aa5.26□□□□□ -1.57
PSPC1-205ENST00000497722 GRB10Q13322 594 aa5.26□□□□□ -1.57
PSPC1-205ENST00000497722 PPP2R5DQ14738 602 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms