RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 RAVER2Q9HCJ3 691 aaKnown RBP12.58□□□□□ -0.4
TOM1-217ENST00000497448 TRIOO75962 3097 aa12.58□□□□□ -0.4
TOM1-217ENST00000497448 CYP2D7A0A087X1C5 515 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
TOM1-217ENST00000497448 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
TOM1-217ENST00000497448 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 FAM133AQ8N9E0 248 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 CHST13Q8NET6 341 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 FBXO40Q9UH90 709 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
TOM1-217ENST00000497448 C5orf42Q9H799 3197 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 ZNF532Q9HCE3 1301 aa12.57□□□□□ -0.4
TOM1-217ENST00000497448 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 GRXCR2A6NFK2 248 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 PRKAB2O43741 272 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 BAIAP3O94812 1187 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 NDUFB10O96000 172 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
TOM1-217ENST00000497448 SUPT20HL2P0C7V6 817 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 TMCO2Q7Z6W1 182 aaPredicted RBP12.56□□□□□ -0.4
TOM1-217ENST00000497448 FBXO16Q8IX29 292 aaPredicted RBP12.56□□□□□ -0.4
TOM1-217ENST00000497448 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
TOM1-217ENST00000497448 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.56□□□□□ -0.4
TOM1-217ENST00000497448 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 SUGCTQ9HAC7 445 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 SLC38A10Q9HBR0 1119 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 PDGFCQ9NRA1 345 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 HOMER2Q9NSB8 354 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 MYH7P12883 1935 aa12.56□□□□□ -0.4
TOM1-217ENST00000497448 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 ST18O60284 1047 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 ZBED4O75132 1171 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 IQCF3P0C7M6 154 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 KCNJ6P48051 423 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 WDR5P61964 334 aaKnown RBP12.55□□□□□ -0.4
TOM1-217ENST00000497448 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 TRMT2AQ8IZ69 625 aaKnown RBP12.55□□□□□ -0.4
TOM1-217ENST00000497448 PRSS33Q8NF86 280 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.55□□□□□ -0.4
TOM1-217ENST00000497448 KIFC2Q96AC6 838 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
TOM1-217ENST00000497448 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
TOM1-217ENST00000497448 Q9Y3F1 56 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 TRIP12Q14669 1992 aaPredicted RBP12.55□□□□□ -0.4
TOM1-217ENST00000497448 KMT2EQ8IZD2 1858 aa12.55□□□□□ -0.4
TOM1-217ENST00000497448 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 ASB14A6NK59 587 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 MBD4O95243 580 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 TRIM27P14373 513 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 RARSP54136 660 aaKnown RBP12.54□□□□□ -0.4
TOM1-217ENST00000497448 OAZ1P54368 228 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 ERVK-21P61565 698 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 DEFB103AP81534 67 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
TOM1-217ENST00000497448 ZP2Q05996 745 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
TOM1-217ENST00000497448 TAPT1Q6NXT6 567 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 EEPD1Q7L9B9 569 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
TOM1-217ENST00000497448 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
TOM1-217ENST00000497448 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 USP17L21D6R901 530 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 F5H6K3 240 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 H3BQ06 376 aaPredicted RBP12.53□□□□□ -0.4
TOM1-217ENST00000497448 BCAR3O75815 825 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 KLRC3Q07444 240 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
TOM1-217ENST00000497448 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 TGS1Q96RS0 853 aaKnown RBP12.53□□□□□ -0.4
TOM1-217ENST00000497448 ATP8A2Q9NTI2 1148 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 NOP58Q9Y2X3 529 aaKnown RBP12.53□□□□□ -0.4
TOM1-217ENST00000497448 ZBED9Q6R2W3 1325 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 TECTAO75443 2155 aa12.53□□□□□ -0.4
TOM1-217ENST00000497448 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 IQSEC1Q6DN90 963 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 AACSQ86V21 672 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 AMOTL1Q8IY63 956 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 RETREG2Q8NC44 543 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 MFSD14AQ96MC6 490 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 RNF146Q9NTX7 359 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 NYAP2Q9P242 653 aa12.52□□□□□ -0.41
TOM1-217ENST00000497448 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms