RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 MMP1P03956 469 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 TAL1P17542 331 aaPredicted RBP11.31□□□□□ -0.6
TCTN3-206ENST00000497399 RESTQ13127 1097 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 COG2Q14746 738 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
TCTN3-206ENST00000497399 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
TCTN3-206ENST00000497399 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
TCTN3-206ENST00000497399 REPS2Q8NFH8 660 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 AGTPBP1Q9UPW5 1226 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 DOCK3Q8IZD9 2030 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
TCTN3-206ENST00000497399 CETPP11597 493 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 XBP1P17861 261 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 GTF2A2P52657 109 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 NAPAP54920 295 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 TRIM29Q14134 588 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 CCL15Q16663 113 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 CCDC174Q6PII3 467 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 FBXO11Q86XK2 927 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 DIS3L2Q8IYB7 885 aaKnown RBP11.3□□□□□ -0.6
TCTN3-206ENST00000497399 FAM177A1Q8N128 213 aaPredicted RBP11.3□□□□□ -0.6
TCTN3-206ENST00000497399 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 TNPO1Q92973 898 aaKnown RBP11.3□□□□□ -0.6
TCTN3-206ENST00000497399 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 ZMYND12Q9H0C1 365 aa11.3□□□□□ -0.6
TCTN3-206ENST00000497399 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 M0R2N6 131 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 VWA5AO00534 786 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 FDX1P10109 184 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.65e-8■■□□□ 12.7
TCTN3-206ENST00000497399 NLRP5P59047 1200 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 FAM173BQ6P4H8 233 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 DAGLBQ8NCG7 672 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 CCDC148Q8NFR7 591 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 CHAMP1Q96JM3 812 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 P2RX7Q99572 595 aaKnown RBP11.29□□□□□ -0.6
TCTN3-206ENST00000497399 ASCC2Q9H1I8 757 aaPredicted RBP11.29□□□□□ -0.6
TCTN3-206ENST00000497399 HOXC10Q9NYD6 342 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
TCTN3-206ENST00000497399 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 OPLAHO14841 1288 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 ZBED4O75132 1171 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 ICAM1P05362 532 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 CALML3P27482 149 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 CTGFP29279 349 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 KRT2P35908 639 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 HERVK_113P62684 666 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 SP3Q02447 781 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 NR5A1Q13285 461 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 USH1GQ495M9 461 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 MCTP1Q6DN14 999 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 LBX2Q6XYB7 198 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 ANKRD23Q86SG2 305 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 CCDC12Q8WUD4 166 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 FOXP1Q9H334 677 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 ZNF214Q9UL59 606 aaPredicted RBP11.28□□□□□ -0.6
TCTN3-206ENST00000497399 PCDHA4Q9UN74 947 aa11.28□□□□□ -0.6
TCTN3-206ENST00000497399 MYH7BA7E2Y1 1941 aa11.27□□□□□ -0.6
TCTN3-206ENST00000497399 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 PEX10O60683 326 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 CNMDO75829 334 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 OAZ1P54368 228 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 IRX3P78415 501 aaPredicted RBP11.27□□□□□ -0.61
TCTN3-206ENST00000497399 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.61
TCTN3-206ENST00000497399 GALNT17Q6IS24 598 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 CPXCR1Q8N123 301 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 RASGRP4Q8TDF6 673 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 C6orf50Q9HD87 102 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 RIC8AQ9NPQ8 531 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 CCPG1Q9ULG6 757 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 SLC45A1Q9Y2W3 748 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 ABCB11O95342 1321 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 ALPK3Q96L96 1907 aa11.27□□□□□ -0.61
TCTN3-206ENST00000497399 PDHXO00330 501 aa11.26□□□□□ -0.61
TCTN3-206ENST00000497399 ATP2A1O14983 1001 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms