RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TRBV23-1A0A0A0MS06 115 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SHTN1A0MZ66 631 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 ANKRD34BA5PLL1 514 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 H3BRJ5 948 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SOX1O00570 391 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 IRS4O14654 1257 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 RGS13O14921 159 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 EFCAB14O75071 495 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 PPFIA4O75335 1185 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SCGB1D2O95969 90 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 ASLP04424 464 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SCG5P05408 212 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 MYL1P05976 194 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 U2AF1L5P0DN76 240 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SDSP20132 328 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 U2AF1Q01081 240 aaKnown RBP eCLIP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 HDAC1Q13547 482 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 MTMR1Q13613 665 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SCARF1Q14162 830 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 CBX2Q14781 532 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 GRIK5Q16478 980 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 PPP2R5EQ16537 467 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 DBN1Q16643 649 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 INAVAQ3KP66 663 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 ZC3H12AQ5D1E8 599 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 FBXW10Q5XX13 1052 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 LRFN4Q6PJG9 635 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 DDX46Q7L014 1031 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 HDXQ7Z353 690 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 ALYREFQ86V81 257 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 MCATQ8IVS2 390 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 MRPL41Q8IXM3 137 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 TCP11L2Q8N4U5 519 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 TTC8Q8TAM2 541 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 GPBAR1Q8TDU6 330 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 OSBP2Q969R2 916 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 PLPPR2Q96GM1 343 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 MRGPRX3Q96LB0 322 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 DHRS1Q96LJ7 313 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 NSUN5Q96P11 429 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SPOCK3Q9BQ16 436 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 LPIN3Q9BQK8 851 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 AARSD1Q9BTE6 412 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 KLHL25Q9H0H3 589 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 GPAMQ9HCL2 828 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 LRRC4BQ9NT99 713 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 DNAJB12Q9NXW2 375 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 SUCOQ9UBS9 1254 aaKnown RBP3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 NRXN3Q9Y4C0 1643 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 PRXQ9BXM0 1461 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 QSER1Q2KHR3 1735 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 FMN2Q9NZ56 1722 aa3.22□□□□□ -1.89
CKS1BP2-201ENST00000497342 ARHGEF5Q12774 1597 aa3.21□□□□□ -1.89
CKS1BP2-201ENST00000497342 CCDC144AA2RUR9 1427 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 TPRP12270 2363 aaKnown RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 TMEM265A0A087WTH1 108 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 DCDC2BA2VCK2 349 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 GLTPD2A6NH11 291 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 AGRPO00253 132 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 CBFA2T2O43439 604 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF862O60290 1169 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 GHRHP01286 108 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 CYP11A1P05108 521 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 CNGA1P29973 690 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 NTF4P34130 210 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 HTR3AP46098 478 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 CDK8P49336 464 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 DGKGP49619 791 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 RAB27AP51159 221 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 GUCY2FP51841 1108 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 EVA1CP58658 441 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ERVK-24P63145 666 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 PPP2R2AP63151 447 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 GABREP78334 506 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 PURAQ00577 322 aaKnown RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 HNRNPUQ00839 825 aaKnown RBP eCLIP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 MORC3Q14149 939 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 INPP5AQ14642 412 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 WIPI1Q5MNZ9 446 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 TMEM240Q5SV17 173 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 WWC2Q6AWC2 1192 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 KIAA1211LQ6NV74 962 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 TMED8Q6PL24 325 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 MPRIPQ6WCQ1 1025 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 STRA8Q7Z7C7 330 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 SPATS2Q86XZ4 545 aaKnown RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 MAGEB6Q8N7X4 407 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ASAP3Q8TDY4 903 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 PNISRQ8TF01 805 aaKnown RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 BHMTQ93088 406 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ACSF2Q96CM8 615 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 VWCEQ96DN2 955 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF837Q96EG3 531 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 IL17RAQ96F46 866 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 GPR101Q96P66 508 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 RTFDC1Q9BY42 306 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 WNT10AQ9GZT5 417 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 TFCP2L1Q9NZI6 479 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 RNF181Q9P0P0 153 aa3.21□□□□□ -1.9
CKS1BP2-201ENST00000497342 CFDP1Q9UEE9 299 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms