RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 NSMFQ6X4W1 530 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 LDHAL6AQ6ZMR3 332 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 RINLQ6ZS11 566 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 C1orf122Q6ZSJ8 110 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 OTOP3Q7RTS5 596 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 VN1R5Q7Z5H4 357 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SRLQ86TD4 932 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SAPCD2Q86UD0 394 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 RASSF3Q86WH2 238 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 FCHSD1Q86WN1 690 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 FAM186BQ8IYM0 893 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 CLASRPQ8N2M8 674 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 CCDC89Q8N998 374 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SNIP1Q8TAD8 396 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 PARD3BQ8TEW8 1205 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 C1orf159Q96HA4 380 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 MRGPRX3Q96LB0 322 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 GPR101Q96P66 508 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 TRERF1Q96PN7 1200 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 ISCA1Q9BUE6 129 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SMOC1Q9H4F8 434 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 ZNF395Q9H8N7 513 aaPredicted RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 NMRK2Q9NPI5 230 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 PDLIM7Q9NR12 457 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 MAN1C1Q9NR34 630 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 DISC1Q9NRI5 854 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 C1orf112Q9NSG2 853 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 TRMT13Q9NUP7 481 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 NDOR1Q9UHB4 597 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SOX13Q9UN79 622 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 SAMM50Q9Y512 469 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 TACC3Q9Y6A5 838 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 CDK13Q14004 1512 aaKnown RBP2.35□□□□□ -2.03
UBR4-217ENST00000497018 RPGRIP1LQ68CZ1 1315 aa2.35□□□□□ -2.03
UBR4-217ENST00000497018 ROBO1Q9Y6N7 1651 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 AKNAQ7Z591 1439 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 RUSC2Q8N2Y8 1516 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 A0A1B0GTH6 734 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 DYTNA2CJ06 578 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 TPP1O14773 563 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 TLR5O60602 858 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SNX2O60749 519 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 GLRX3O76003 335 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 SNUPNO95149 360 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 EPHX1P07099 455 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 THBS1P07996 1170 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 CT47B1P0C2W7 299 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 RARAP10276 462 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 TGFB3P10600 412 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 NAT2P11245 290 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 YBX3P16989 372 aaKnown RBP eCLIP2.34□□□□□ -2.03
UBR4-217ENST00000497018 ZKSCAN1P17029 563 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 TNFAIP3P21580 790 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 POLR2BP30876 1174 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 GRIK1P39086 918 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 IL6STP40189 918 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 IREB2P48200 963 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 LSSP48449 732 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 PPM1FP49593 454 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 WDR4P57081 412 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 HTRA3P83110 453 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ATP11AP98196 1134 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 CYP4F3Q08477 520 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ADCY1Q08828 1119 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SFSWAPQ12872 951 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 DDX10Q13206 875 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 BIRC3Q13489 604 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 INPP5AQ14642 412 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 TOMM20Q15388 145 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ALDH1L2Q3SY69 923 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 GNPTABQ3T906 1256 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 CFAP100Q494V2 611 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SV2CQ496J9 727 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ATP13A4Q4VNC1 1196 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ARHGAP29Q52LW3 1261 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 RRP12Q5JTH9 1297 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 HEATR6Q6AI08 1181 aaKnown RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 C1orf228Q6PIY5 440 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 LRFN4Q6PJG9 635 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 KRT25Q7Z3Z0 450 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 ZNF354CQ86Y25 554 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SLC41A1Q8IVJ1 513 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 TMEM192Q8IY95 271 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 CYP4X1Q8N118 509 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 CLRN3Q8NCR9 226 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 CXorf38Q8TB03 319 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SLC35G2Q8TBE7 412 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 PGBD4Q96DM1 585 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 HSPBAP1Q96EW2 488 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 PLPPR2Q96GM1 343 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 TBATAQ96M53 351 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 PPM1MQ96MI6 270 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 SCLT1Q96NL6 688 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 INSM2Q96T92 566 aaPredicted RBP2.34□□□□□ -2.03
UBR4-217ENST00000497018 NELL2Q99435 816 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 HAUS7Q99871 368 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 EMILIN2Q9BXX0 1053 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 PBX4Q9BYU1 374 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 NRSN2Q9GZP1 204 aa2.34□□□□□ -2.03
UBR4-217ENST00000497018 OSBPL5Q9H0X9 879 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms