RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 JAMLQ86YT9 394 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 IRF2BP1Q8IU81 584 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 DIRC2Q96SL1 478 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 NSUN3Q9H649 340 aaKnown RBP7.62□□□□□ -1.19
SNX13-211ENST00000496855 ACSL6Q9UKU0 697 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 FARP2O94887 1054 aaPredicted RBP7.61□□□□□ -1.19
SNX13-211ENST00000496855 PNLIPP16233 465 aa7.61□□□□□ -1.19
SNX13-211ENST00000496855 PRKCAP17252 672 aa7.61□□□□□ -1.19
SNX13-211ENST00000496855 SF3A1Q15459 793 aaKnown RBP7.61□□□□□ -1.19
SNX13-211ENST00000496855 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
SNX13-211ENST00000496855 IMPACTQ9P2X3 320 aa7.61□□□□□ -1.19
SNX13-211ENST00000496855 TBX1O43435 398 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 MESP2Q0VG99 397 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 SCRN1Q12765 414 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 NBPF6Q5VWK0 638 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 NUP43Q8NFH3 380 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 BTN2A2Q8WVV5 523 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 COPS5Q92905 334 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 NBPF4Q96M43 638 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 HIRIP3Q9BW71 556 aaPredicted RBP7.6□□□□□ -1.19
SNX13-211ENST00000496855 NKX2-4Q9H2Z4 354 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 EPB41L4BQ9H329 900 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 CYP26B1Q9NR63 512 aa7.6□□□□□ -1.19
SNX13-211ENST00000496855 U2SURPO15042 1029 aaKnown RBP7.59□□□□□ -1.19
SNX13-211ENST00000496855 IGSF3O75054 1194 aa7.59□□□□□ -1.19
SNX13-211ENST00000496855 PDE6BP35913 854 aa7.59□□□□□ -1.19
SNX13-211ENST00000496855 DCP1AQ9NPI6 582 aaPredicted RBP7.59□□□□□ -1.19
SNX13-211ENST00000496855 A0A1W2PQ27 194 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 A0A1W2PQ64 194 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 A0A1W2PQC6 194 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 A0A1W2PQD8 194 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 AGRPO00253 132 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 L1CAMP32004 1257 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 ARL4AP40617 200 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 CYP4F8P98187 520 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 MVKQ03426 396 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 RBL2Q08999 1139 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 LAPTM5Q13571 262 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 ADGRF1Q5T601 910 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 ZNF648Q5T619 568 aaPredicted RBP7.58□□□□□ -1.2
SNX13-211ENST00000496855 FAM84AQ96KN4 292 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 GPRC5CQ9NQ84 441 aa7.58□□□□□ -1.2
SNX13-211ENST00000496855 TRBV23OR9-2A0A075B6M9 112 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 NPHP3-ACAD11A0A0J9YXS1 232 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 OR14I1A6ND48 311 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 PAMP19021 973 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 CYP4F3Q08477 520 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 FBXO15Q8NCQ5 510 aaPredicted RBP7.57□□□□□ -1.2
SNX13-211ENST00000496855 ST13P5Q8NFI4 369 aaPredicted RBP7.57□□□□□ -1.2
SNX13-211ENST00000496855 KCNK12Q9HB15 430 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
SNX13-211ENST00000496855 THBDP07204 575 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 MSL3P1P0C860 447 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 PLS3P13797 630 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 HOXC12P31275 282 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 CORO7P57737 925 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 ERVFRD-1P60508 538 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 ZNF605Q86T29 641 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 CPNE8Q86YQ8 564 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 NLGN2Q8NFZ4 835 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 SREK1Q8WXA9 508 aaKnown RBP7.56□□□□□ -1.2
SNX13-211ENST00000496855 ZNF552Q9H707 407 aaPredicted RBP7.56□□□□□ -1.2
SNX13-211ENST00000496855 CLEC1BQ9P126 229 aa7.56□□□□□ -1.2
SNX13-211ENST00000496855 A0A1W2PQU0 124 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 CAPNS1P04632 268 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 SDHBP21912 280 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 PPP2R2AP63151 447 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 FRS2Q8WU20 508 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 TNFRSF12AQ9NP84 129 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 PDLIM7Q9NR12 457 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 SIRPGQ9P1W8 387 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 SCG5P05408 212 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 SNRPB2P08579 225 aaKnown RBP7.55□□□□□ -1.2
SNX13-211ENST00000496855 NPLOC4Q8TAT6 608 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 SGSM3Q96HU1 749 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 CCDC140Q96MF4 163 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 MMP19Q99542 508 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 SLC38A3Q99624 504 aa7.55□□□□□ -1.2
SNX13-211ENST00000496855 IQCA1LA6NCM1 817 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 PEX10O60683 326 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 CPP00450 1065 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 MPOP05164 745 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 ECI1P42126 302 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 SERINC3Q13530 473 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 SF1Q15637 639 aaKnown RBP7.54□□□□□ -1.2
SNX13-211ENST00000496855 SYDE1Q6ZW31 735 aaPredicted RBP7.54□□□□□ -1.2
SNX13-211ENST00000496855 ZNF669Q96BR6 464 aaPredicted RBP7.54□□□□□ -1.2
SNX13-211ENST00000496855 SLC26A8Q96RN1 970 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 CCDC113Q9H0I3 377 aa7.54□□□□□ -1.2
SNX13-211ENST00000496855 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 C7orf72A4D263 438 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 HRKO00198 91 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 PDPK1O15530 556 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 C8AP07357 584 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 GRIA2P42262 883 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 KCNJ6P48051 423 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 GFRA1P56159 465 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 MBLAC2Q68D91 279 aa7.53□□□□□ -1.2
SNX13-211ENST00000496855 MCOLN1Q9GZU1 580 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms