RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
RNF220-217ENST00000496262 EEPD1Q7L9B9 569 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 PCSK9Q8NBP7 692 aaKnown RBP12.86□□□□□ -0.35
RNF220-217ENST00000496262 RILPL2Q969X0 211 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
RNF220-217ENST00000496262 FRMPD2Q68DX3 1309 aaPredicted RBP12.86□□□□□ -0.35
RNF220-217ENST00000496262 TNFAIP2Q03169 654 aa12.85□□□□□ -0.35
RNF220-217ENST00000496262 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
RNF220-217ENST00000496262 FAM109BQ6ICB4 259 aaPredicted RBP12.85□□□□□ -0.35
RNF220-217ENST00000496262 TTBK2Q6IQ55 1244 aa12.85□□□□□ -0.35
RNF220-217ENST00000496262 ANKRD33Q7Z3H0 272 aa12.85□□□□□ -0.35
RNF220-217ENST00000496262 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
RNF220-217ENST00000496262 FBXO16Q8IX29 292 aaPredicted RBP12.85□□□□□ -0.35
RNF220-217ENST00000496262 PURBQ96QR8 312 aaKnown RBP12.85□□□□□ -0.35
RNF220-217ENST00000496262 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
RNF220-217ENST00000496262 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
RNF220-217ENST00000496262 A0A0U1RQG5 324 aaPredicted RBP12.84□□□□□ -0.35
RNF220-217ENST00000496262 ASB14A6NK59 587 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 ORC4O43929 436 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 FGAP02671 866 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
RNF220-217ENST00000496262 GJA9P57773 515 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
RNF220-217ENST00000496262 TKFCQ3LXA3 575 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 TLK2Q86UE8 772 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 CDX2Q99626 313 aaPredicted RBP12.84□□□□□ -0.35
RNF220-217ENST00000496262 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 KATNBL1Q9H079 304 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 UPF3AQ9H1J1 476 aaKnown RBP12.84□□□□□ -0.35
RNF220-217ENST00000496262 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 ASTN1O14525 1302 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 MROH7Q68CQ1 1323 aa12.84□□□□□ -0.35
RNF220-217ENST00000496262 PLA2G6O60733 806 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 TIMP1P01033 207 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 ICAM1P05362 532 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 HSPD1P10809 573 aaKnown RBP12.83□□□□□ -0.36
RNF220-217ENST00000496262 SMAD3P84022 425 aaKnown RBP12.83□□□□□ -0.36
RNF220-217ENST00000496262 ALX1Q15699 326 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 SYDE2Q5VT97 1194 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 CXCL17Q6UXB2 119 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 MYLIPQ8WY64 445 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
RNF220-217ENST00000496262 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 CYP39A1Q9NYL5 469 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 TBX21Q9UL17 535 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 UNC80Q8N2C7 3258 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 ELP1O95163 1332 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
RNF220-217ENST00000496262 EYSQ5T1H1 3165 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 MCM3APO60318 1980 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 PTPDC1A2A3K4 754 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 ARVCFO00192 962 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 NFIBO00712 420 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 CTAGE5O15320 804 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
RNF220-217ENST00000496262 TOP1P11387 765 aaKnown RBP12.82□□□□□ -0.36
RNF220-217ENST00000496262 SMPD1P17405 629 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
RNF220-217ENST00000496262 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 MFSD6Q6ZSS7 791 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 ZKSCAN3Q9BRR0 538 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 AP5M1Q9H0R1 490 aa12.82□□□□□ -0.36
RNF220-217ENST00000496262 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
RNF220-217ENST00000496262 FGRP09769 529 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 ACRP10323 421 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 CALML3P27482 149 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 CDK7P50613 346 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 BAATQ14032 418 aaPredicted RBP12.81□□□□□ -0.36
RNF220-217ENST00000496262 MFSD5Q6N075 450 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNF220-217ENST00000496262 FAM126BQ8IXS8 530 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNF220-217ENST00000496262 RANBP17Q9H2T7 1088 aaKnown RBP12.81□□□□□ -0.36
RNF220-217ENST00000496262 GNEQ9Y223 722 aaKnown RBP12.81□□□□□ -0.36
RNF220-217ENST00000496262 NEDD4P46934 1319 aa12.81□□□□□ -0.36
RNF220-217ENST00000496262 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 FOSL2P15408 326 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 CSF2RAP15509 400 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 CYP2C18P33260 490 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 NOVP48745 357 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 PSMC6P62333 389 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 TAPT1Q6NXT6 567 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 KIAA1211Q6ZU35 1233 aa12.8□□□□□ -0.36
RNF220-217ENST00000496262 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
RNF220-217ENST00000496262 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
RNF220-217ENST00000496262 ZEB2O60315 1214 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms