RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204		A0A087WZG4	1122 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	SRGAP3	O43295	1099 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	BUB1B	O60566	1050 aa	Predicted RBP	4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	VAMP1	P23763	118 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	SOX9	P48436	509 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	ZNF200	P98182	395 aa	Predicted RBP	4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	TMEM62	Q0P6H9	643 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	PAK2	Q13177	524 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	NR1I3	Q14994	352 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	NOL9	Q5SY16	702 aa	Known RBP	4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	CWF19L1	Q69YN2	538 aa	Known RBP	4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	CYP2R1	Q6VVX0	501 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	CCDC81	Q6ZN84	652 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	HOMEZ	Q8IX15	550 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	SYT8	Q8NBV8	401 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	NLGN2	Q8NFZ4	835 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	PWWP2A	Q96N64	755 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	PTCHD1	Q96NR3	888 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	NOL6	Q9H6R4	1146 aa	Known RBP	4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	PDLIM7	Q9NR12	457 aa		4.4	□□□□□ -1.71
RAD50-208	ENST00000496204	FFAR3	O14843	346 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	PPP1R11	O60927	126 aa	Predicted RBP	4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	CYBB	P04839	570 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	ATF2	P15336	505 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	GIPR	P48546	466 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	KRTAP10-2	P60368	255 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	CAP1	Q01518	475 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	TMCO4	Q5TGY1	634 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	FBXW10	Q5XX13	1052 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	ZC3H14	Q6PJT7	736 aa	Known RBP	4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	PAQR3	Q6TCH7	311 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	NAT16	Q8N8M0	369 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	LINC01356	Q8N9X3	169 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	FEZF2	Q8TBJ5	459 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	HAUS7	Q99871	368 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	KLHL25	Q9H0H3	589 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	BCL11A	Q9H165	835 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204	FBLN5	Q9UBX5	448 aa		4.39	□□□□□ -1.71
RAD50-208	ENST00000496204		A0A1W2PQH9	124 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	AURKA	O14965	403 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	CD3E	P07766	207 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	ITGA4	P13612	1032 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	NOP2	P46087	812 aa	Known RBP	4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	LIMS1	P48059	325 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	CORO7	P57737	925 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	COL9A2	Q14055	689 aa	Predicted RBP	4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	NFIX	Q14938	502 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	VWA3B	Q502W6	1294 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	JAML	Q86YT9	394 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	ZNF654	Q8IZM8	581 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	CXorf38	Q8TB03	319 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	RASGRP4	Q8TDF6	673 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	KLHL6	Q8WZ60	621 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	ZDHHC15	Q96MV8	337 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	LUC7L	Q9NQ29	371 aa	Known RBP	4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	SUSD2	Q9UGT4	822 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	PCDHB10	Q9UN67	800 aa		4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	DIS3	Q9Y2L1	958 aa	Known RBP	4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	SF3B6	Q9Y3B4	125 aa	Known RBP	4.38	□□□□□ -1.71
RAD50-208	ENST00000496204	SCAMP3	O14828	347 aa	Known RBP	4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	SASH1	O94885	1247 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	PLA2G1B	P04054	148 aa	Known RBP	4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	EPHX1	P07099	455 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	GLI4	P10075	376 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	TACR1	P25103	407 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	L1CAM	P32004	1257 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	MFAP1	P55081	439 aa	Known RBP	4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	HTRA3	P83110	453 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	PRR5	P85299	388 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	POU4F1	Q01851	419 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	PPP2R5D	Q14738	602 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	TCEAL1	Q15170	157 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	BICRAL	Q6AI39	1079 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	RCSD1	Q6JBY9	416 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	C19orf47	Q8N9M1	422 aa	Known RBP	4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	ADCY4	Q8NFM4	1077 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	SHD	Q96IW2	340 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	WHRN	Q9P202	907 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204	EFR3B	Q9Y2G0	817 aa		4.37	□□□□□ -1.71
RAD50-208	ENST00000496204		A0A1W2PQ27	194 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204		A0A1W2PQ64	194 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204		A0A1W2PQC6	194 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204		A0A1W2PQD8	194 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	ZC3H12D	A2A288	527 aa	Known RBP	4.36	□□□□□ -1.71
RAD50-208	ENST00000496204		F8W031	263 aa	Predicted RBP	4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	VAMP4	O75379	141 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	TBC1D8	O95759	1140 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	EIF6	P56537	245 aa	Known RBP	4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	FOXO4	P98177	505 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	DLX2	Q07687	328 aa	Predicted RBP	4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	GNPTAB	Q3T906	1256 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	EEF1DP3	Q658K8	133 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	ZDHHC14	Q8IZN3	488 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	ARHGEF39	Q8N4T4	335 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	FNIP1	Q8TF40	1166 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	PHAX	Q9H814	394 aa	Known RBP	4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	ADAMTS20	P59510	1910 aa		4.36	□□□□□ -1.71
RAD50-208	ENST00000496204	STXBP3	O00186	592 aa		4.35	□□□□□ -1.71

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