RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 ERCC3P19447 782 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 FOSBP53539 338 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
PTPN7-218ENST00000496197 HEATR3Q7Z4Q2 680 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 CLEC4DQ8WXI8 215 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 AMNQ9BXJ7 453 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 VPS54Q9P1Q0 977 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
PTPN7-218ENST00000496197 PCDHA1Q9Y5I3 950 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 ZNF236Q9UL36 1845 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 DEXIO95424 95 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 GJB2P29033 226 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 TRIM22Q8IYM9 498 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 TBC1D5Q92609 795 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 RNF146Q9NTX7 359 aa15.59■□□□□ 0.09
PTPN7-218ENST00000496197 CASP8AP2Q9UKL3 1982 aa15.58■□□□□ 0.08
PTPN7-218ENST00000496197 LRRC37A2A6NM11 1700 aa15.58■□□□□ 0.08
PTPN7-218ENST00000496197 GPR25O00155 361 aa15.58■□□□□ 0.08
PTPN7-218ENST00000496197 NCAPG2Q86XI2 1143 aa15.58■□□□□ 0.08
PTPN7-218ENST00000496197 TRERF1Q96PN7 1200 aa15.58■□□□□ 0.08
PTPN7-218ENST00000496197 BARHL2Q9NY43 387 aa15.58■□□□□ 0.08
PTPN7-218ENST00000496197 ABCB11O95342 1321 aa15.57■□□□□ 0.08
PTPN7-218ENST00000496197 AKAP17AQ02040 695 aaKnown RBP15.57■□□□□ 0.08
PTPN7-218ENST00000496197 NPY5RQ15761 445 aa15.57■□□□□ 0.08
PTPN7-218ENST00000496197 ALG1Q9BT22 464 aa15.57■□□□□ 0.08
PTPN7-218ENST00000496197 FOXN1O15353 648 aa15.56■□□□□ 0.08
PTPN7-218ENST00000496197 NAPAP54920 295 aa15.56■□□□□ 0.08
PTPN7-218ENST00000496197 LACTBP83111 547 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-218ENST00000496197 GPR142Q7Z601 462 aa15.56■□□□□ 0.08
PTPN7-218ENST00000496197 SHCBP1Q8NEM2 672 aa15.56■□□□□ 0.08
PTPN7-218ENST00000496197 ZNF296Q8WUU4 475 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-218ENST00000496197 INTS4Q96HW7 963 aaKnown RBP15.56■□□□□ 0.08
PTPN7-218ENST00000496197 PURBQ96QR8 312 aaKnown RBP15.56■□□□□ 0.08
PTPN7-218ENST00000496197 RBM27Q9P2N5 1060 aaKnown RBP15.56■□□□□ 0.08
PTPN7-218ENST00000496197 KCNJ14Q9UNX9 436 aa15.56■□□□□ 0.08
PTPN7-218ENST00000496197 SMC3Q9UQE7 1217 aa15.56■□□□□ 0.08
PTPN7-218ENST00000496197 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-218ENST00000496197 MCM3APO60318 1980 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 SLC25A27O95847 323 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 HMGN5P82970 282 aaKnown RBP15.55■□□□□ 0.08
PTPN7-218ENST00000496197 SP3Q02447 781 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 WDR78Q5VTH9 848 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 SLC30A10Q6XR72 485 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 CD99L2Q8TCZ2 262 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 TRIM47Q96LD4 638 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 BEGAINQ9BUH8 593 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 ACAD9Q9H845 621 aa15.55■□□□□ 0.08
PTPN7-218ENST00000496197 A1CFQ9NQ94 594 aaKnown RBP15.55■□□□□ 0.08
PTPN7-218ENST00000496197 MYH7BA7E2Y1 1941 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 HSPA1AP0DMV8 641 aaKnown RBP15.54■□□□□ 0.08
PTPN7-218ENST00000496197 HSPA1BP0DMV9 641 aaKnown RBP15.54■□□□□ 0.08
PTPN7-218ENST00000496197 ANP32AP39687 249 aaKnown RBP15.54■□□□□ 0.08
PTPN7-218ENST00000496197 CCNA1P78396 465 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 GUCY1B3Q02153 619 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 UBE2SQ16763 222 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 TKFCQ3LXA3 575 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 CHST13Q8NET6 341 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 PHF20Q9BVI0 1012 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 MROH8Q9H579 483 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 COL20A1Q9P218 1284 aa15.54■□□□□ 0.08
PTPN7-218ENST00000496197 MRPL11Q9Y3B7 192 aaKnown RBP15.54■□□□□ 0.08
PTPN7-218ENST00000496197 SMCO2A6NFE2 343 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 hCG_1984214I3L0E3 225 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 MEIS2O14770 477 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 HSPA8P11142 646 aaKnown RBP15.53■□□□□ 0.08
PTPN7-218ENST00000496197 HOXA13P31271 388 aaPredicted RBP15.53■□□□□ 0.08
PTPN7-218ENST00000496197 BECN1Q14457 450 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 USP17L6PQ6QN14 398 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 NSMFQ6X4W1 530 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTPN7-218ENST00000496197 ZNF713Q8N859 430 aaPredicted RBP15.53■□□□□ 0.08
PTPN7-218ENST00000496197 FAM184AQ8NB25 1140 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 ZMYND12Q9H0C1 365 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 CYP39A1Q9NYL5 469 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 ASTN1O14525 1302 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 MYH15Q9Y2K3 1946 aa15.53■□□□□ 0.08
PTPN7-218ENST00000496197 CFBP00751 764 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 PGK2P07205 417 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 MAPK4P31152 587 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 PSMC4P43686 418 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 HSD17B4P51659 736 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 GHRHRQ02643 423 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-218ENST00000496197 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
PTPN7-218ENST00000496197 KRT40Q6A162 431 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 PPP1R18Q6NYC8 613 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 PLEKHH3Q7Z736 793 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 RASGRP4Q8TDF6 673 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 OXER1Q8TDS5 423 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 FGD4Q96M96 766 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 MMP19Q99542 508 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 SH3GLB2Q9NR46 395 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 TMEM260Q9NX78 707 aa15.52■□□□□ 0.08
PTPN7-218ENST00000496197 DDX49Q9Y6V7 483 aaKnown RBP15.52■□□□□ 0.08
PTPN7-218ENST00000496197 ESYT2A0FGR8 921 aa15.52■□□□□ 0.07
PTPN7-218ENST00000496197 M0R2N6 131 aa15.52■□□□□ 0.07
PTPN7-218ENST00000496197 FKTNO75072 461 aa15.52■□□□□ 0.07
PTPN7-218ENST00000496197 COBLO75128 1261 aa15.52■□□□□ 0.07
PTPN7-218ENST00000496197 PTPREP23469 700 aa15.52■□□□□ 0.07
PTPN7-218ENST00000496197 COPB2P35606 906 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms