RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 MUM1L1Q5H9M0 696 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 AKNAD1Q5T1N1 836 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 SYDE2Q5VT97 1194 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 FAM109BQ6ICB4 259 aaPredicted RBP21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 TTBK2Q6IQ55 1244 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 NSMFQ6X4W1 530 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 CYP39A1Q9NYL5 469 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 ELP1O95163 1332 aa21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 FRMPD2Q68DX3 1309 aaPredicted RBP21.7■■□□□ 1.06
CLCNKA-207ENST00000495784 MCM3APO60318 1980 aa21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 SDSP20132 328 aa21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 FAAP100Q0VG06 881 aa21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 RANBP17Q9H2T7 1088 aaKnown RBP21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 GPCPD1Q9NPB8 672 aa21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 MROH7Q68CQ1 1323 aa21.69■■□□□ 1.06
CLCNKA-207ENST00000495784 IGHDP01880 384 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 NUCB1Q02818 461 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 ZNF697Q5TEC3 545 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 BTNL9Q6UXG8 535 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 TBC1D10CQ8IV04 446 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 PLEKHM2Q8IWE5 1019 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 COL6A3P12111 3177 aa21.68■■□□□ 1.06
CLCNKA-207ENST00000495784 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.67■■□□□ 1.06
CLCNKA-207ENST00000495784 FPGSQ05932 587 aa21.67■■□□□ 1.06
CLCNKA-207ENST00000495784 EXOC6Q8TAG9 804 aa21.67■■□□□ 1.06
CLCNKA-207ENST00000495784 FAM161BQ96MY7 647 aa21.67■■□□□ 1.06
CLCNKA-207ENST00000495784 TTC14Q96N46 770 aa21.67■■□□□ 1.06
CLCNKA-207ENST00000495784 DIAPH3Q9NSV4 1193 aa21.67■■□□□ 1.06
CLCNKA-207ENST00000495784 ASTN1O14525 1302 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 A0A0U1RQG5 324 aaPredicted RBP21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 ZNF213O14771 459 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 PDHBP11177 359 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 CWC27Q6UX04 472 aaKnown RBP21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 EEPD1Q7L9B9 569 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 TLK2Q86UE8 772 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 ESR2Q92731 530 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 RNPC3Q96LT9 517 aaKnown RBP21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 AP5M1Q9H0R1 490 aa21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 DDX49Q9Y6V7 483 aaKnown RBP21.66■■□□□ 1.06
CLCNKA-207ENST00000495784 ARVCFO00192 962 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 CTAGE5O15320 804 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 CDK7P50613 346 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 EPHB4P54760 987 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 NKX3-2P78367 333 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 BEX3Q00994 111 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 BAATQ14032 418 aaPredicted RBP21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 FBXO16Q8IX29 292 aaPredicted RBP21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 ADD3Q9UEY8 706 aaKnown RBP21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 TBX21Q9UL17 535 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 PNMA2Q9UL42 364 aa21.65■■□□□ 1.06
CLCNKA-207ENST00000495784 HIP1O00291 1037 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 TIMP1P01033 207 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 SMAD3P84022 425 aaKnown RBP21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 ZNF543Q08ER8 600 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 FSCN1Q16658 493 aaKnown RBP21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 IQSEC1Q6DN90 963 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 GUCD1Q96NT3 240 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 PURBQ96QR8 312 aaKnown RBP21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 VTA1Q9NP79 307 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 PDGFCQ9NRA1 345 aa21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 GNEQ9Y223 722 aaKnown RBP21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 LAMA2P24043 3122 aaKnown RBP21.64■■□□□ 1.05
CLCNKA-207ENST00000495784 NEDD4P46934 1319 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 PTPDC1A2A3K4 754 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 NFIBO00712 420 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 TLR3O15455 904 aaKnown RBP21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 DYNC1LI2O43237 492 aaPredicted RBP21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 ZEB2O60315 1214 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 SMPD1P17405 629 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 CXCL17Q6UXB2 119 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 ZKSCAN3Q9BRR0 538 aa21.63■■□□□ 1.05
CLCNKA-207ENST00000495784 CABYRO75952 493 aa21.62■■□□□ 1.05
CLCNKA-207ENST00000495784 NT5C2P49902 561 aa21.62■■□□□ 1.05
CLCNKA-207ENST00000495784 TAPT1Q6NXT6 567 aa21.62■■□□□ 1.05
CLCNKA-207ENST00000495784 KIAA1211Q6ZU35 1233 aa21.62■■□□□ 1.05
CLCNKA-207ENST00000495784 IQCA1Q86XH1 822 aa21.62■■□□□ 1.05
CLCNKA-207ENST00000495784 FAM126BQ8IXS8 530 aa21.62■■□□□ 1.05
CLCNKA-207ENST00000495784 SNHG28P0DPA3 235 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 CALML3P27482 149 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 ALDH5A1P51649 535 aaPredicted RBP21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 GPATCH4Q5T3I0 446 aaKnown RBP21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 MFSD5Q6N075 450 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 RNF207Q6ZRF8 634 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 DGKHQ86XP1 1220 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 MORC4Q8TE76 937 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 Q9Y3F1 56 aa21.61■■□□□ 1.05
CLCNKA-207ENST00000495784 WDR19Q8NEZ3 1342 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 LOC102724159A0A0B4J2E5 919 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 KDM4AO75164 1064 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 PTGS1P23219 599 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 PPIGQ13427 754 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 PWP2Q15269 919 aaKnown RBP21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 CCDC178Q5BJE1 867 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 SLC30A10Q6XR72 485 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 CLEC4DQ8WXI8 215 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 MPHOSPH6Q99547 160 aaKnown RBP21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 LRRC37A2A6NM11 1700 aa21.6■■□□□ 1.05
CLCNKA-207ENST00000495784 DLL1O00548 723 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms