RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 FBXO11Q86XK2 927 aa23.26■■□□□ 1.31
LMO4-204ENST00000495705 SH3TC2Q8TF17 1288 aa23.26■■□□□ 1.31
LMO4-204ENST00000495705 AMNQ9BXJ7 453 aa23.26■■□□□ 1.31
LMO4-204ENST00000495705 PFASO15067 1338 aa23.26■■□□□ 1.31
LMO4-204ENST00000495705 ABCB11O95342 1321 aa23.26■■□□□ 1.31
LMO4-204ENST00000495705 CCDC196A0A1B0GTZ2 297 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 PLEKHA8P1O95397 391 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 HMGCRP04035 888 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 METAP2P50579 478 aaKnown RBP eCLIP23.25■■□□□ 1.31
LMO4-204ENST00000495705 UBXN2AP68543 259 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 USH1GQ495M9 461 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 HOMER1Q86YM7 354 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 PIGSQ96S52 555 aa23.25■■□□□ 1.31
LMO4-204ENST00000495705 ALDH8A1Q9H2A2 487 aaPredicted RBP23.25■■□□□ 1.31
LMO4-204ENST00000495705 BIN2Q9UBW5 565 aaPredicted RBP23.25■■□□□ 1.31
LMO4-204ENST00000495705 DIS3Q9Y2L1 958 aaKnown RBP23.25■■□□□ 1.31
LMO4-204ENST00000495705 PNMA6FA0A0J9YX94 578 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 COBLO75128 1261 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 RBM25P49756 843 aaKnown RBP23.24■■□□□ 1.31
LMO4-204ENST00000495705 ANKRD1Q15327 319 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 MUM1L1Q5H9M0 696 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 SRBD1Q8N5C6 995 aaKnown RBP23.24■■□□□ 1.31
LMO4-204ENST00000495705 NPLOC4Q8TAT6 608 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 TRIB2Q92519 343 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 RRP36Q96EU6 259 aaKnown RBP23.24■■□□□ 1.31
LMO4-204ENST00000495705 ZNF333Q96JL9 665 aa23.24■■□□□ 1.31
LMO4-204ENST00000495705 A1CFQ9NQ94 594 aaKnown RBP23.24■■□□□ 1.31
LMO4-204ENST00000495705 SEC63Q9UGP8 760 aaKnown RBP23.24■■□□□ 1.31
LMO4-204ENST00000495705 DNAJC25-GNG10A0A024R161 153 aa23.23■■□□□ 1.31
LMO4-204ENST00000495705 PGK2P07205 417 aa23.23■■□□□ 1.31
LMO4-204ENST00000495705 TAL1P17542 331 aaPredicted RBP23.23■■□□□ 1.31
LMO4-204ENST00000495705 OLFML2BQ68BL8 750 aa23.23■■□□□ 1.31
LMO4-204ENST00000495705 MAF1Q9H063 256 aa23.23■■□□□ 1.31
LMO4-204ENST00000495705 MRPL11Q9Y3B7 192 aaKnown RBP23.23■■□□□ 1.31
LMO4-204ENST00000495705 INHAP05111 366 aa23.22■■□□□ 1.31
LMO4-204ENST00000495705 CCL14Q16627 93 aa23.22■■□□□ 1.31
LMO4-204ENST00000495705 ZNF792Q3KQV3 632 aa23.22■■□□□ 1.31
LMO4-204ENST00000495705 NSMFQ6X4W1 530 aa23.22■■□□□ 1.31
LMO4-204ENST00000495705 ZNF274Q96GC6 653 aaPredicted RBP23.22■■□□□ 1.31
LMO4-204ENST00000495705 POTEB2H3BUK9 544 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 NFIBO00712 420 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 PDIA3P30101 505 aaKnown RBP23.21■■□□□ 1.31
LMO4-204ENST00000495705 MFSD14CQ5VZR4 134 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 RGS22Q8NE09 1264 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 CLEC4DQ8WXI8 215 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 MAML3Q96JK9 1138 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 BACH2Q9BYV9 841 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 CYP39A1Q9NYL5 469 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 PCDHA1Q9Y5I3 950 aa23.21■■□□□ 1.31
LMO4-204ENST00000495705 CNTNAP5Q8WYK1 1306 aa23.2■■□□□ 1.3
LMO4-204ENST00000495705 PPP1R11O60927 126 aaPredicted RBP23.2■■□□□ 1.3
LMO4-204ENST00000495705 CDC27P30260 824 aa23.2■■□□□ 1.3
LMO4-204ENST00000495705 NEK4P51957 841 aa23.2■■□□□ 1.3
LMO4-204ENST00000495705 MCF2L2Q86YR7 1114 aa23.2■■□□□ 1.3
LMO4-204ENST00000495705 CMTR1Q8N1G2 835 aaKnown RBP23.2■■□□□ 1.3
LMO4-204ENST00000495705 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
LMO4-204ENST00000495705 AK2P54819 239 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 RNF207Q6ZRF8 634 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 ZNF467Q7Z7K2 595 aaPredicted RBP23.19■■□□□ 1.3
LMO4-204ENST00000495705 CCDC82Q8N4S0 544 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 MSL3Q8N5Y2 521 aaKnown RBP23.19■■□□□ 1.3
LMO4-204ENST00000495705 FAM133AQ8N9E0 248 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 PIBF1Q8WXW3 757 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 FLRT1Q9NZU1 646 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 LCTP09848 1927 aa23.19■■□□□ 1.3
LMO4-204ENST00000495705 PTPDC1A2A3K4 754 aa23.18■■□□□ 1.3
LMO4-204ENST00000495705 IGHA2P01877 340 aa23.18■■□□□ 1.3
LMO4-204ENST00000495705 ADD1P35611 737 aaKnown RBP23.18■■□□□ 1.3
LMO4-204ENST00000495705 FUT2Q10981 343 aa23.18■■□□□ 1.3
LMO4-204ENST00000495705 MAP3K21Q5TCX8 1036 aa23.18■■□□□ 1.3
LMO4-204ENST00000495705 CCDC85CA6NKD9 419 aa23.17■■□□□ 1.3
LMO4-204ENST00000495705 PRKAR2AP13861 404 aaKnown RBP23.17■■□□□ 1.3
LMO4-204ENST00000495705 BAATQ14032 418 aaPredicted RBP23.17■■□□□ 1.3
LMO4-204ENST00000495705 SAMD3Q8N6K7 520 aa23.17■■□□□ 1.3
LMO4-204ENST00000495705 KIF2CQ99661 725 aa23.17■■□□□ 1.3
LMO4-204ENST00000495705 TINF2Q9BSI4 451 aa23.17■■□□□ 1.3
LMO4-204ENST00000495705 RBM27Q9P2N5 1060 aaKnown RBP23.17■■□□□ 1.3
LMO4-204ENST00000495705 RPTORQ8N122 1335 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 SYNGAP1Q96PV0 1343 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 RPS6P62753 249 aaKnown RBP23.16■■□□□ 1.3
LMO4-204ENST00000495705 CCT2P78371 535 aaKnown RBP23.16■■□□□ 1.3
LMO4-204ENST00000495705 CNTN2Q02246 1040 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 TRIM32Q13049 653 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 MAMDC4Q6UXC1 1216 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 SLC30A10Q6XR72 485 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 TBC1D32Q96NH3 1257 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 TMEM106CQ9BVX2 250 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 MAP3K20Q9NYL2 800 aaKnown RBP23.16■■□□□ 1.3
LMO4-204ENST00000495705 ADD3Q9UEY8 706 aaKnown RBP23.16■■□□□ 1.3
LMO4-204ENST00000495705 CENPFP49454 3210 aa23.16■■□□□ 1.3
LMO4-204ENST00000495705 KIAA0100Q14667 2235 aaKnown RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 LOC102724159A0A0B4J2E5 919 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 hCG_1984214I3L0E3 225 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 CCL5P13501 91 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 CYP2C19P33261 490 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 GHRHRQ02643 423 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 CACNB2Q08289 660 aaPredicted RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 PWP2Q15269 919 aaKnown RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 RABEP1Q15276 862 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms