RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
COL1A1-209ENST00000495677 TMEM67Q5HYA8 995 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 TLK2Q86UE8 772 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 KIFC2Q96AC6 838 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
COL1A1-209ENST00000495677 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 BRWD1Q9NSI6 2320 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 TANC1Q9C0D5 1861 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
COL1A1-209ENST00000495677 GPR37L1O60883 481 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 MYOGP15173 224 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 KCNQ1P51787 676 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 TKFCQ3LXA3 575 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 PHOSPHO2Q8TCD6 241 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 STRBPQ96SI9 672 aaKnown RBP16.07■□□□□ 0.16
COL1A1-209ENST00000495677 TRPV6Q9H1D0 765 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 EPHX3Q9H6B9 360 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 ACAD9Q9H845 621 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 HCN4Q9Y3Q4 1203 aa16.07■□□□□ 0.16
COL1A1-209ENST00000495677 SOWAHBA6NEL2 793 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 GSG1L2A8MUP6 293 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
COL1A1-209ENST00000495677 PLA2G6O60733 806 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 CHGBP05060 677 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 SMPD1P17405 629 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 NOL8Q76FK4 1167 aaKnown RBP16.06■□□□□ 0.16
COL1A1-209ENST00000495677 MORC4Q8TE76 937 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
COL1A1-209ENST00000495677 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
COL1A1-209ENST00000495677 ZNF536O15090 1300 aa16.05■□□□□ 0.16
COL1A1-209ENST00000495677 TTLL1O95922 423 aa16.05■□□□□ 0.16
COL1A1-209ENST00000495677 TMEM31Q5JXX7 168 aa16.05■□□□□ 0.16
COL1A1-209ENST00000495677 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
COL1A1-209ENST00000495677 SCLYQ96I15 445 aa16.05■□□□□ 0.16
COL1A1-209ENST00000495677 SLC9A7Q96T83 725 aa16.05■□□□□ 0.16
COL1A1-209ENST00000495677 ALDH8A1Q9H2A2 487 aaPredicted RBP16.05■□□□□ 0.16
COL1A1-209ENST00000495677 COG6Q9Y2V7 657 aa16.05■□□□□ 0.16
COL1A1-209ENST00000495677 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 HMMRO75330 724 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 BMP3P12645 472 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 RFC2P35250 354 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 TTLL4Q14679 1199 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 FAM160B2Q86V87 743 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
COL1A1-209ENST00000495677 PLIN4Q96Q06 1357 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 RFXAPO00287 272 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 CA3P07451 260 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 ACTN1P12814 892 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 STAT2P52630 851 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
COL1A1-209ENST00000495677 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
COL1A1-209ENST00000495677 DUSP28Q4G0W2 176 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 HLA-CQ95604 372 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 VTA1Q9NP79 307 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 PDGFCQ9NRA1 345 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
COL1A1-209ENST00000495677 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 PI4K2BG5E9Z4 385 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 PSMC6P62333 389 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 TAP1Q03518 808 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 GMCL1Q96IK5 515 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 CYP39A1Q9NYL5 469 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 SIP14410 1827 aa16.02■□□□□ 0.16
COL1A1-209ENST00000495677 COL4A4P53420 1690 aaPredicted RBP16.02■□□□□ 0.15
COL1A1-209ENST00000495677 TNKSO95271 1327 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 EPOPA6NHQ4 379 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 KIF28PB7ZC32 967 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 TMEM232C9JQI7 657 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 GNAT2P19087 354 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
COL1A1-209ENST00000495677 KIAA1211Q6ZU35 1233 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 C11orf16Q9NQ32 467 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 MUC6Q6W4X9 2439 aa16.01■□□□□ 0.15
COL1A1-209ENST00000495677 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
COL1A1-209ENST00000495677 IQCF3P0C7M6 154 aa16■□□□□ 0.15
COL1A1-209ENST00000495677 MS4A1P11836 297 aa16■□□□□ 0.15
COL1A1-209ENST00000495677 TMEM63BQ5T3F8 832 aa16■□□□□ 0.15
COL1A1-209ENST00000495677 TRMT13Q9NUP7 481 aaKnown RBP16■□□□□ 0.15
COL1A1-209ENST00000495677 PIEZO1Q92508 2521 aa16■□□□□ 0.15
COL1A1-209ENST00000495677 LPXNO60711 386 aa15.99■□□□□ 0.15
COL1A1-209ENST00000495677 BAIAP3O94812 1187 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms