RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 FBXO11Q86XK2 927 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 TRIB2Q92519 343 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 APBA2Q99767 749 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 LZTS2Q9BRK4 669 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 SPZ1Q9BXG8 430 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 FLRT1Q9NZU1 646 aa22.56■■□□□ 1.2
HDAC4-212ENST00000495497 BIN2Q9UBW5 565 aaPredicted RBP22.56■■□□□ 1.2
HDAC4-212ENST00000495497 RBM25P49756 843 aaKnown RBP22.55■■□□□ 1.2
HDAC4-212ENST00000495497 NEK4P51957 841 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 AK2P54819 239 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 EVCP57679 992 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 CCT2P78371 535 aaKnown RBP22.55■■□□□ 1.2
HDAC4-212ENST00000495497 NSMFQ6X4W1 530 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 SLAIN1Q8ND83 568 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 PXYLP1Q8TE99 480 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 CLEC4DQ8WXI8 215 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 DDX11Q96FC9 970 aa22.55■■□□□ 1.2
HDAC4-212ENST00000495497 A1CFQ9NQ94 594 aaKnown RBP22.55■■□□□ 1.2
HDAC4-212ENST00000495497 RBM28Q9NW13 759 aaKnown RBP22.55■■□□□ 1.2
HDAC4-212ENST00000495497 PNMA6FA0A0J9YX94 578 aa22.54■■□□□ 1.2
HDAC4-212ENST00000495497 HOXC6P09630 235 aa22.54■■□□□ 1.2
HDAC4-212ENST00000495497 XRCC5P13010 732 aaKnown RBP22.54■■□□□ 1.2
HDAC4-212ENST00000495497 STK3Q13188 491 aa22.54■■□□□ 1.2
HDAC4-212ENST00000495497 NOL8Q76FK4 1167 aaKnown RBP22.54■■□□□ 1.2
HDAC4-212ENST00000495497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.54■■□□□ 1.2
HDAC4-212ENST00000495497 AMNQ9BXJ7 453 aa22.54■■□□□ 1.2
HDAC4-212ENST00000495497 ALDH8A1Q9H2A2 487 aaPredicted RBP22.54■■□□□ 1.2
HDAC4-212ENST00000495497 UPF2Q9HAU5 1272 aaKnown RBP22.54■■□□□ 1.2
HDAC4-212ENST00000495497 SMARCA1P28370 1054 aa22.53■■□□□ 1.2
HDAC4-212ENST00000495497 RCAN1P53805 252 aa22.53■■□□□ 1.2
HDAC4-212ENST00000495497 ZNF792Q3KQV3 632 aa22.53■■□□□ 1.2
HDAC4-212ENST00000495497 TBC1D5Q92609 795 aa22.53■■□□□ 1.2
HDAC4-212ENST00000495497 RRP36Q96EU6 259 aaKnown RBP22.53■■□□□ 1.2
HDAC4-212ENST00000495497 NCOA5Q9HCD5 579 aaKnown RBP22.53■■□□□ 1.2
HDAC4-212ENST00000495497 SMCHD1A6NHR9 2005 aa22.53■■□□□ 1.2
HDAC4-212ENST00000495497 PPFIA3O75145 1194 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 INHAP05111 366 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 CNTN2Q02246 1040 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 FUT2Q10981 343 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 ARMC5Q96C12 935 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 MAML3Q96JK9 1138 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 ZNF333Q96JL9 665 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 PURBQ96QR8 312 aaKnown RBP22.52■■□□□ 1.2
HDAC4-212ENST00000495497 PNMA2Q9UL42 364 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 TPCN1Q9ULQ1 816 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 PCDHA1Q9Y5I3 950 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 ABCB11O95342 1321 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 CNTNAP5Q8WYK1 1306 aa22.52■■□□□ 1.2
HDAC4-212ENST00000495497 DNAJC25-GNG10A0A024R161 153 aa22.51■■□□□ 1.19
HDAC4-212ENST00000495497 HMGCRP04035 888 aa22.51■■□□□ 1.19
HDAC4-212ENST00000495497 BAATQ14032 418 aaPredicted RBP22.51■■□□□ 1.19
HDAC4-212ENST00000495497 MTFR1Q15390 333 aa22.51■■□□□ 1.19
HDAC4-212ENST00000495497 ZNF274Q96GC6 653 aaPredicted RBP22.51■■□□□ 1.19
HDAC4-212ENST00000495497 SLC5A4Q9NY91 659 aa22.51■■□□□ 1.19
HDAC4-212ENST00000495497 CYP39A1Q9NYL5 469 aa22.51■■□□□ 1.19
HDAC4-212ENST00000495497 NID2Q14112 1375 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 BAZ2BQ9UIF8 2168 aaKnown RBP22.5■■□□□ 1.19
HDAC4-212ENST00000495497 PTPDC1A2A3K4 754 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 POTEB2H3BUK9 544 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 CYP2C19P33261 490 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 SLC30A10Q6XR72 485 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 FGD4Q96M96 766 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 TBC1D32Q96NH3 1257 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 SEC63Q9UGP8 760 aaKnown RBP22.5■■□□□ 1.19
HDAC4-212ENST00000495497 MRPL11Q9Y3B7 192 aaKnown RBP22.5■■□□□ 1.19
HDAC4-212ENST00000495497 V9GY48 417 aaPredicted RBP22.5■■□□□ 1.19
HDAC4-212ENST00000495497 ZNF236Q9UL36 1845 aa22.5■■□□□ 1.19
HDAC4-212ENST00000495497 CCDC85CA6NKD9 419 aa22.49■■□□□ 1.19
HDAC4-212ENST00000495497 CALML3P27482 149 aa22.49■■□□□ 1.19
HDAC4-212ENST00000495497 TRMT44Q8IYL2 757 aaKnown RBP22.49■■□□□ 1.19
HDAC4-212ENST00000495497 PFASO15067 1338 aa22.49■■□□□ 1.19
HDAC4-212ENST00000495497 CENPFP49454 3210 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 CCDC196A0A1B0GTZ2 297 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 SOWAHBA6NEL2 793 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 OPLAHO14841 1288 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 LARGE1O95461 756 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 UBXN2AP68543 259 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 CACNB2Q08289 660 aaPredicted RBP22.48■■□□□ 1.19
HDAC4-212ENST00000495497 PPP2R5BQ15173 497 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 ANKRD1Q15327 319 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 OLFML2BQ68BL8 750 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 RNF207Q6ZRF8 634 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 FAM133AQ8N9E0 248 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 PHKBQ93100 1093 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 UNC93B1Q9H1C4 597 aa22.48■■□□□ 1.19
HDAC4-212ENST00000495497 DIS3Q9Y2L1 958 aaKnown RBP22.48■■□□□ 1.19
HDAC4-212ENST00000495497 DDX49Q9Y6V7 483 aaKnown RBP22.48■■□□□ 1.19
HDAC4-212ENST00000495497 DTNBO60941 627 aa22.47■■□□□ 1.19
HDAC4-212ENST00000495497 IGHA2P01877 340 aa22.47■■□□□ 1.19
HDAC4-212ENST00000495497 PRKAR2AP13861 404 aaKnown RBP22.47■■□□□ 1.19
HDAC4-212ENST00000495497 RPS6P62753 249 aaKnown RBP22.47■■□□□ 1.19
HDAC4-212ENST00000495497 NTRK3Q16288 839 aa22.47■■□□□ 1.19
HDAC4-212ENST00000495497 PRAMEF19Q5SWL8 479 aa22.47■■□□□ 1.19
HDAC4-212ENST00000495497 MFSD14CQ5VZR4 134 aa22.47■■□□□ 1.19
HDAC4-212ENST00000495497 GPKOWQ92917 476 aaPredicted RBP eCLIP22.47■■□□□ 1.19
HDAC4-212ENST00000495497 ZNFX1Q9P2E3 1918 aaKnown RBP22.47■■□□□ 1.19
HDAC4-212ENST00000495497 CFBP00751 764 aa22.46■■□□□ 1.19
HDAC4-212ENST00000495497 CCL5P13501 91 aa22.46■■□□□ 1.19
HDAC4-212ENST00000495497 SCRN1Q12765 414 aa22.46■■□□□ 1.19
HDAC4-212ENST00000495497 ME3Q16798 604 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms