RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
SRRM1-218ENST00000494934 HSPA12BQ96MM6 686 aa7.52□□□□□ -1.21
SRRM1-218ENST00000494934 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
SRRM1-218ENST00000494934 GNAT3A8MTJ3 354 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 HYAL3O43820 417 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-218ENST00000494934 SCG5P05408 212 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 PDGFRBP09619 1106 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 ECI1P42126 302 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 NMIQ13287 307 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-218ENST00000494934 STRA8Q7Z7C7 330 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 AFAP1L2Q8N4X5 818 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 KREMEN2Q8NCW0 462 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 PIWIL2Q8TC59 973 aaKnown RBP7.51□□□□□ -1.21
SRRM1-218ENST00000494934 KCTD13Q8WZ19 329 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 GPR62Q9BZJ7 368 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 DIS3Q9Y2L1 958 aaKnown RBP7.51□□□□□ -1.21
SRRM1-218ENST00000494934 TRAF6Q9Y4K3 522 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 TNPO3Q9Y5L0 923 aaKnown RBP7.51□□□□□ -1.21
SRRM1-218ENST00000494934 PITPNM2Q9BZ72 1349 aa7.51□□□□□ -1.21
SRRM1-218ENST00000494934 STXBP3O00186 592 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 RASGRP1O95267 797 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 SOX5P35711 763 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 CD96P40200 585 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 KCNJ6P48051 423 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 SCRN1Q12765 414 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 BNIP3Q12983 259 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 SPRED2Q7Z698 418 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 BCL7CQ8WUZ0 217 aaPredicted RBP7.5□□□□□ -1.21
SRRM1-218ENST00000494934 HDAC8Q9BY41 377 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 CHST7Q9NS84 486 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 TYW1Q9NV66 732 aaKnown RBP7.5□□□□□ -1.21
SRRM1-218ENST00000494934 INTS7Q9NVH2 962 aaKnown RBP7.5□□□□□ -1.21
SRRM1-218ENST00000494934 BSDC1Q9NW68 430 aaPredicted RBP7.5□□□□□ -1.21
SRRM1-218ENST00000494934 CCDC39Q9UFE4 941 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 MAPRE3Q9UPY8 281 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 SNX11Q9Y5W9 270 aa7.5□□□□□ -1.21
SRRM1-218ENST00000494934 ARNTLO00327 626 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 PARNO95453 639 aaKnown RBP7.49□□□□□ -1.21
SRRM1-218ENST00000494934 HOXC12P31275 282 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 GRIK1P39086 918 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 CLCN7P51798 805 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 GABREP78334 506 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 AMPD2Q01433 879 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 SEPT7Q16181 437 aaKnown RBP7.49□□□□□ -1.21
SRRM1-218ENST00000494934 GAB4Q2WGN9 574 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 CDKAL1Q5VV42 579 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 USP53Q70EK8 1073 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 DDX1Q92499 740 aaKnown RBP7.49□□□□□ -1.21
SRRM1-218ENST00000494934 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
SRRM1-218ENST00000494934 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
SRRM1-218ENST00000494934 SF3B6Q9Y3B4 125 aaKnown RBP7.49□□□□□ -1.21
SRRM1-218ENST00000494934 TMEM265A0A087WTH1 108 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 H3BS24 57 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 THBDP07204 575 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 CD3EP07766 207 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 IFNGR1P15260 489 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 NFKB2Q00653 900 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 PRKCQQ04759 706 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 LRP8Q14114 963 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 PCBP1Q15365 356 aaKnown RBP eCLIP7.48□□□□□ -1.21
SRRM1-218ENST00000494934 KCNT2Q6UVM3 1135 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
SRRM1-218ENST00000494934 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 HOMER2Q9NSB8 354 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
SRRM1-218ENST00000494934 FAM155AB1AL88 458 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-218ENST00000494934 EYA4O95677 639 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 FAM50AQ14320 339 aaKnown RBP7.47□□□□□ -1.21
SRRM1-218ENST00000494934 AOC3Q16853 763 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 BRDTQ58F21 947 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-218ENST00000494934 CT47A1Q5JQC4 288 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-218ENST00000494934 ARHGAP27Q6ZUM4 889 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 LHFPL2Q6ZUX7 228 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 NPLOC4Q8TAT6 608 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 FRS2Q8WU20 508 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 COPS5Q92905 334 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 MTFR1LQ9H019 292 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 ATP13A1Q9HD20 1204 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 GPRC5CQ9NQ84 441 aa7.47□□□□□ -1.21
SRRM1-218ENST00000494934 TMEFF2Q9UIK5 374 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-218ENST00000494934 G3BP2Q9UN86 482 aaKnown RBP7.47□□□□□ -1.21
SRRM1-218ENST00000494934 TCRBV16S1A1N1A0A5B0 115 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 KPNA6O60684 536 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 EFCAB14O75071 495 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 CRTAMO95727 393 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 ESR1P03372 595 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 S100BP04271 92 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-218ENST00000494934 CD8BP10966 210 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 POU3F2P20265 443 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-218ENST00000494934 ARTNQ5T4W7 220 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 STYK1Q6J9G0 422 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 MAMDC2Q7Z304 686 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-218ENST00000494934 THAP5Q7Z6K1 395 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 FERMT3Q86UX7 667 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 CCDC103Q8IW40 242 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 PPIL6Q8IXY8 311 aa7.46□□□□□ -1.22
SRRM1-218ENST00000494934 LEO1Q8WVC0 666 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-218ENST00000494934 UBE2FQ969M7 185 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms