RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PRELPP51888 382 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 KARSQ15046 597 aaKnown RBP12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 CDC37Q16543 378 aaPredicted RBP12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 UBE2SQ16763 222 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 BTNL9Q6UXG8 535 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 CCDC186Q7Z3E2 898 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 PYM1Q9BRP8 204 aaKnown RBP12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 TMEM39BQ9GZU3 492 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 DISC1Q9NRI5 854 aa12.04□□□□□ -0.48
PRPF4B-209ENST00000494674 TBC1D12O60347 775 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 SMC2O95347 1197 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 TDP2O95551 362 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 R3HDM1Q15032 1099 aaKnown RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 STAMQ92783 540 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 CUL5Q93034 780 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 GSDMAQ96QA5 445 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 VEZTQ9HBM0 779 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 PYCARDQ9ULZ3 195 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 SLC37A4O43826 429 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 EGFRP00533 1210 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 ECE1P42892 770 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 PTGER2P43116 358 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 CUL4BQ13620 913 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 IGSF22Q8N9C0 903 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 ACER1Q8TDN7 264 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 AK8Q96MA6 479 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 MMTAG2Q9BU76 263 aaKnown RBP12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 FANCLQ9NW38 375 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 IFNKQ9P0W0 207 aa12.03□□□□□ -0.48
PRPF4B-209ENST00000494674 RAD21O60216 631 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 BMP3P12645 472 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 ZNF18P17022 549 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 TXLNAP40222 546 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 TNNI2P48788 182 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 FANCCQ00597 558 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 LRMPQ12912 555 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 SYDE2Q5VT97 1194 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 DRC7Q8IY82 874 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 CACTINQ8WUQ7 758 aaKnown RBP12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 BLZF1Q9H2G9 400 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 PARP14Q460N5 1801 aa12.02□□□□□ -0.49
PRPF4B-209ENST00000494674 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 MYO1BO43795 1136 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 OFD1O75665 1012 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 ERCC5P28715 1186 aaPredicted RBP12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 STAT6P42226 847 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 MMP14P50281 582 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 MRPL12P52815 198 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 SNAP25P60880 206 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 TPM4P67936 248 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 PPP4R3AQ6IN85 833 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 C17orf53Q8N3J3 647 aaPredicted RBP12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 CRYGNQ8WXF5 182 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 DPF2Q92785 391 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 TEPSINQ96N21 525 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 SPTLC3Q9NUV7 552 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 KBTBD4Q9NVX7 518 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 SBF1O95248 1867 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 DOCK1Q14185 1865 aa12.01□□□□□ -0.49
PRPF4B-209ENST00000494674 TMEM232C9JQI7 657 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 MEIS2O14770 477 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 OPLAHO14841 1288 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 UBA7P41226 1012 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
PRPF4B-209ENST00000494674 RASSF7Q02833 373 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 ARID5BQ14865 1188 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 TNIP1Q15025 636 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 SMYD4Q8IYR2 804 aaPredicted RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 INTS13Q9NVM9 706 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 RBBP6Q7Z6E9 1792 aaKnown RBP12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L15C9J2P7 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L11C9JVI0 530 aa12□□□□□ -0.49
PRPF4B-209ENST00000494674 USP17L18D6R9N7 530 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms