RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 ANKRD20A8PQ5CZ79 823 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 EMC10Q5UCC4 262 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ZNF772Q68DY9 489 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 ADALQ6DHV7 355 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CAPRIN2Q6IMN6 1127 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 IQCEQ6IPM2 695 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 FAM173BQ6P4H8 233 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 LARP1Q6PKG0 1096 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 SLC30A9Q6PML9 568 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TRAF7Q6Q0C0 670 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 MTHFD1LQ6UB35 978 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SYNE3Q6ZMZ3 975 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CCDC121Q6ZUS5 278 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TOGARAM2Q6ZUX3 1019 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 BZW1Q7L1Q6 419 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 RASGRP2Q7LDG7 609 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TRAPPC11Q7Z392 1133 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ZNF572Q7Z3I7 529 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 ARHGAP22Q7Z5H3 698 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 FAM228AQ86W67 206 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 UNC5CLQ8IV45 518 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TRMT44Q8IYL2 757 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 FUKQ8N0W3 1084 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SLC35F6Q8N357 371 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 FNBP4Q8N3X1 1017 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 B4GALNT2Q8NHY0 566 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 MYCBPAPQ8TBZ2 947 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 AENQ8WTP8 325 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 EZH1Q92800 747 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 BRF1Q92994 677 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CAVIN3Q969G5 261 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SYTL4Q96C24 671 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 CCDC51Q96ER9 411 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 AGBL1Q96MI9 1066 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CCDC85AQ96PX6 553 aaPredicted RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 SPAG5Q96R06 1193 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 RUFY1Q96T51 708 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SLX1AQ9BQ83 275 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 GORASP1Q9BQQ3 440 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 LLPHQ9BRT6 129 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 EPN3Q9H201 632 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 HSD3B7Q9H2F3 369 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 NOP53Q9NZM5 478 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 LMCD1Q9NZU5 365 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SLAIN2Q9P270 581 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 GMPR2Q9P2T1 348 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 PUF60Q9UHX1 559 aaKnown RBP3.05□□□□□ -1.92
MDC1-208ENST00000494654 TUBE1Q9UJT0 475 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 BLOC1S6Q9UL45 172 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 FAM184BQ9ULE4 1060 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TPCN1Q9ULQ1 816 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 ZNF232Q9UNY5 417 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 CHMP3Q9Y3E7 222 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 SBF2Q86WG5 1849 aa3.05□□□□□ -1.92
MDC1-208ENST00000494654 TNRC6CQ9HCJ0 1690 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 DISP2A7MBM2 1401 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 FAM237AA0A1B0GTK4 181 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ANO9A1A5B4 782 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 FRMD3A2A2Y4 597 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SPDYE3A6NKU9 549 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TMEM232C9JQI7 657 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 H3BQV1 296 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ERVH48-1M5A8F1 160 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 LILRA1O75019 489 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 HSF2BPO75031 334 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 MFAP3LO75121 409 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 GLRX3O76003 335 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 WFS1O76024 890 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RNF8O76064 485 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ZNF202O95125 648 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ZIC2O95409 532 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 NPTXRO95502 500 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 MAP4K4O95819 1239 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 FAM107AO95990 144 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SERPINC1P01008 464 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 AVPP01185 164 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PYGLP06737 847 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PAEPP09466 180 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 RHOXF2BP0C7M4 288 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 ZKSCAN1P17029 563 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 YY1P25490 414 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 LMOD1P29536 600 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 LSP1P33241 339 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PAPOLAP51003 745 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 SH3BGRP55822 239 aaPredicted RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 MRPS35P82673 323 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 ATP8B2P98198 1209 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 HDLBPQ00341 1268 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 ATP2B2Q01814 1243 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PDCLQ13371 301 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 DYNC1I2Q13409 638 aaKnown RBP3.04□□□□□ -1.92
MDC1-208ENST00000494654 TMED1Q13445 227 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 CUL3Q13618 768 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 TRIM14Q14142 442 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 KRT32Q14532 448 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SEPT2Q15019 361 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 NECTIN1Q15223 517 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 E2F5Q15329 346 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 PTGISQ16647 500 aa3.04□□□□□ -1.92
MDC1-208ENST00000494654 SGSM1Q2NKQ1 1148 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms