RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 LAMC1P11047 1609 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 GPR75-ASB3A0A0A6YYF3 556 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 FAM170AA1A519 330 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 MAGEA13PA6NCF6 341 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 GMNCA6NCL1 334 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 SFI1A8K8P3 1242 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 IKBKBO14920 756 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 SLC26A4O43511 780 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 STX10O60499 249 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 GNA14O95837 355 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 PDCP20941 246 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 TRPC1P48995 793 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 CEBPAP49715 358 aaPredicted RBP4.46□□□□□ -1.7
ATG3-207ENST00000494571 SKOR1P84550 965 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 LRP8Q14114 963 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 SAFB2Q14151 953 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATG3-207ENST00000494571 ADCK5Q3MIX3 580 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 CFAP58Q5T655 872 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 ALS2CLQ60I27 953 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 C1orf228Q6PIY5 440 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
ATG3-207ENST00000494571 CCNI2Q6ZMN8 369 aaPredicted RBP4.46□□□□□ -1.7
ATG3-207ENST00000494571 EXOC3L1Q86VI1 746 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 FAM133AQ8N9E0 248 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 FBF1Q8TES7 1133 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 HDAC7Q8WUI4 952 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 WDR60Q8WVS4 1066 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 PPP1R14BQ96C90 147 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 ZNF653Q96CK0 615 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 ZIM3Q96PE6 472 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 PSMB7Q99436 277 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 SLC39A3Q9BRY0 314 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 DMAP1Q9NPF5 467 aaPredicted RBP4.46□□□□□ -1.7
ATG3-207ENST00000494571 GPHNQ9NQX3 736 aaPredicted RBP4.46□□□□□ -1.7
ATG3-207ENST00000494571 INIPQ9NRY2 104 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 CFAP45Q9UL16 551 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 ZMYND8Q9ULU4 1186 aaPredicted RBP4.46□□□□□ -1.7
ATG3-207ENST00000494571 TMCO1Q9UM00 188 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 TRIM33Q9UPN9 1127 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 EFR3BQ9Y2G0 817 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 ASB3Q9Y575 518 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 ABCC1P33527 1531 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 NEURL4Q96JN8 1562 aa4.46□□□□□ -1.7
ATG3-207ENST00000494571 A0A1W2PQ67 120 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ZNF185O15231 689 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 JAK2O60674 1132 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 HIP1RO75146 1068 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 PEX14O75381 377 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 NUP155O75694 1391 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 SLC3A2P08195 630 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 RAD23BP54727 409 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 MTTPP55157 894 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ARPC4P59998 168 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ATP11AP98196 1134 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DHX9Q08211 1270 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 ST3GAL1Q11201 340 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 NHSL1Q5SYE7 1610 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 FOXB2Q5VYV0 432 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DPY19L2Q6NUT2 758 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DUS1LQ6P1R4 473 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 SLC2A7Q6PXP3 512 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 POTEEQ6S8J3 1075 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 PACS1Q6VY07 963 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 RAD9BQ6WBX8 426 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DAAM2Q86T65 1068 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 PEX5LQ8IYB4 626 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 CYP4X1Q8N118 509 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 TEX9Q8N6V9 391 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 IFT81Q8WYA0 676 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 BRF1Q92994 677 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DDX50Q9BQ39 737 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 DRC3Q9H069 523 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 EIF2AK4Q9P2K8 1649 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 TRIM10Q9UDY6 481 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 SCOCQ9UIL1 159 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 CROTQ9UKG9 612 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 TFR2Q9UP52 801 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 CYP46A1Q9Y6A2 500 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 SHPRHQ149N8 1683 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 CAMSAP1Q5T5Y3 1602 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 FAM135BQ49AJ0 1406 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 TRIM64CA6NLI5 447 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 A6NNZ2 444 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 IGF2BP3O00425 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATG3-207ENST00000494571 FYB1O15117 783 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 DNAJC8O75937 253 aaPredicted RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 CCND1P24385 295 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 AMPHP49418 695 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 GALK1P51570 392 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 TUBB4BP68371 445 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 LACTBP83111 547 aaPredicted RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 MUM1Q2TAK8 710 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 TUBB8Q3ZCM7 444 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 ZNF362Q5T0B9 420 aaPredicted RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 TMEM214Q6NUQ4 689 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 SCUBE1Q8IWY4 988 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 CLASRPQ8N2M8 674 aaKnown RBP4.45□□□□□ -1.7
ATG3-207ENST00000494571 TSPYL6Q8N831 410 aa4.45□□□□□ -1.7
ATG3-207ENST00000494571 TC2NQ8N9U0 490 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms