RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 RANBP17Q9H2T7 1088 aaKnown RBP7.76□□□□□ -1.17
MSH5-217ENST00000494458 SH2D4AQ9H788 454 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 GPCPD1Q9NPB8 672 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 ADARB2Q9NS39 739 aaKnown RBP7.76□□□□□ -1.17
MSH5-217ENST00000494458 TUBE1Q9UJT0 475 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 GJA3Q9Y6H8 435 aa7.76□□□□□ -1.17
MSH5-217ENST00000494458 TMEM232C9JQI7 657 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 MEIS2O14770 477 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 OPLAHO14841 1288 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 DDNO94850 711 aaPredicted RBP7.75□□□□□ -1.17
MSH5-217ENST00000494458 SLC16A2P36021 539 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 SARSP49591 514 aaKnown RBP7.75□□□□□ -1.17
MSH5-217ENST00000494458 USP11P51784 963 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 MRPL12P52815 198 aaKnown RBP7.75□□□□□ -1.17
MSH5-217ENST00000494458 TRAF1Q13077 416 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 PTGDRQ13258 359 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 NONOQ15233 471 aaKnown RBP eCLIP7.75□□□□□ -1.17
MSH5-217ENST00000494458 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 ANGEL2Q5VTE6 544 aaKnown RBP7.75□□□□□ -1.17
MSH5-217ENST00000494458 DCAF15Q66K64 600 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 MOXD1Q6UVY6 613 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 CCDC73Q6ZRK6 1079 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 USP50Q70EL3 339 aaPredicted RBP7.75□□□□□ -1.17
MSH5-217ENST00000494458 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 FAM160B2Q86V87 743 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 SAMD3Q8N6K7 520 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 CHURC1Q8WUH1 139 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 COA7Q96BR5 231 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 PDLIM2Q96JY6 352 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 TMEM106CQ9BVX2 250 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 AMNQ9BXJ7 453 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 ZNF341Q9BYN7 854 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 TNMDQ9H2S6 317 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 TSPY26PQ9H489 355 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 VAT1LQ9HCJ6 419 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 USP25Q9UHP3 1055 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 FEM1BQ9UK73 627 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 PRR12Q9ULL5 1215 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 ADAMTS5Q9UNA0 930 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 SSC5DA1L4H1 1573 aa7.75□□□□□ -1.17
MSH5-217ENST00000494458 CCDC194A0A1B0GVG4 234 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 GLTPD2A6NH11 291 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 POTECB2RU33 542 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 WDR46O15213 610 aaKnown RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 ACTN4O43707 911 aaKnown RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 KINO60870 393 aaKnown RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 USP2O75604 605 aaPredicted RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 CYP3A4P08684 503 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 CCDC192P0DO97 292 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 FDX1P10109 184 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 PTPRAP18433 802 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 CIITAP33076 1130 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 LONP1P36776 959 aaKnown RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 SYKP43405 635 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 ADCY7P51828 1080 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 STAT2P52630 851 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 TYRO3Q06418 890 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 ZNF174Q15697 407 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 E2F4Q16254 413 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 CDC37Q16543 378 aaPredicted RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 CCDC96Q2M329 555 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 SUPT20HL1Q3ZLR7 823 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 C9orf131Q5VYM1 1079 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 KRBA2Q6ZNG9 492 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 NEK8Q86SG6 692 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 HOMER1Q86YM7 354 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 REXO1Q8N1G1 1221 aaKnown RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 IGSF22Q8N9C0 903 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.74□□□□□ -1.17
MSH5-217ENST00000494458 RASGRP4Q8TDF6 673 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 PPP1R9BQ96SB3 815 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 NUP88Q99567 741 aaPredicted RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 P2RX7Q99572 595 aaKnown RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 GLIS2Q9BZE0 524 aaPredicted RBP7.74□□□□□ -1.17
MSH5-217ENST00000494458 CCSER1Q9C0I3 900 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 PSTPIP2Q9H939 334 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 EMILIN3Q9NT22 766 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 RNF181Q9P0P0 153 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 KIAA1468Q9P260 1216 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 PCDHA1Q9Y5I3 950 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 ZNF536O15090 1300 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
MSH5-217ENST00000494458 POTEB3A0JP26 581 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 UNCXA6NJT0 531 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 C19orf81C9J6K1 198 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 FOSP01100 380 aaPredicted RBP7.73□□□□□ -1.17
MSH5-217ENST00000494458 INPP5BP32019 993 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 USP14P54578 494 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 BACE1P56817 501 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 ATP2B2Q01814 1243 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 PDIA5Q14554 519 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms