RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 HPCAL4Q9UM19 191 aa18.61■□□□□ 0.57
SYP-208ENST00000494396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
SYP-208ENST00000494396 SLX4Q8IY92 1834 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 C10orf71Q711Q0 1435 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 GAKO14976 1311 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 ATXN2Q99700 1313 aaKnown RBP18.6■□□□□ 0.57
SYP-208ENST00000494396 TEX33O43247 280 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 GYPCP04921 128 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 CASP14P31944 242 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 PTPN21Q16825 1174 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 MCTP2Q6DN12 878 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 PODNQ7Z5L7 613 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 TRIM22Q8IYM9 498 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
SYP-208ENST00000494396 FANCBQ8NB91 859 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 C7orf43Q8WVR3 580 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 PYM1Q9BRP8 204 aaKnown RBP18.6■□□□□ 0.57
SYP-208ENST00000494396 ABHD10Q9NUJ1 306 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
SYP-208ENST00000494396 LIMA1Q9UHB6 759 aaKnown RBP18.6■□□□□ 0.57
SYP-208ENST00000494396 MYH6P13533 1939 aa18.6■□□□□ 0.57
SYP-208ENST00000494396 PRDM1O75626 825 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 USP17L8P0C7I0 530 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 PRR29P0C7W0 189 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 CYP2D6P10635 497 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 ARHGAP25P42331 645 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 STIM1Q13586 685 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 IQCA1Q86XH1 822 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 TGFBRAP1Q8WUH2 860 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 SUGCTQ9HAC7 445 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 UBE2Q2LH0YL09 131 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 C12orf60Q5U649 245 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 FOXR1Q6PIV2 292 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 SH3RF1Q7Z6J0 888 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 CRACR2AQ9BSW2 395 aa18.59■□□□□ 0.57
SYP-208ENST00000494396 NT5C2P49902 561 aa18.58■□□□□ 0.57
SYP-208ENST00000494396 EVX2Q03828 476 aa18.58■□□□□ 0.57
SYP-208ENST00000494396 PPP2R5BQ15173 497 aa18.58■□□□□ 0.57
SYP-208ENST00000494396 CCDC70Q6NSX1 233 aa18.58■□□□□ 0.57
SYP-208ENST00000494396 TEX11Q8IYF3 940 aa18.58■□□□□ 0.57
SYP-208ENST00000494396 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.57
SYP-208ENST00000494396 FAM76AQ8TAV0 307 aa18.58■□□□□ 0.57
SYP-208ENST00000494396 EBAG9O00559 213 aa18.58■□□□□ 0.56
SYP-208ENST00000494396 TOB1P50616 345 aaPredicted RBP18.58■□□□□ 0.56
SYP-208ENST00000494396 PAPD7Q5XG87 772 aaKnown RBP18.58■□□□□ 0.56
SYP-208ENST00000494396 SPATS2Q86XZ4 545 aaKnown RBP18.58■□□□□ 0.56
SYP-208ENST00000494396 CERS5Q8N5B7 392 aa18.58■□□□□ 0.56
SYP-208ENST00000494396 NOA1Q8NC60 698 aaKnown RBP18.58■□□□□ 0.56
SYP-208ENST00000494396 TACO1Q9BSH4 297 aaKnown RBP18.58■□□□□ 0.56
SYP-208ENST00000494396 DBNDD1Q9H9R9 158 aa18.58■□□□□ 0.56
SYP-208ENST00000494396 MYH8P13535 1937 aa18.57■□□□□ 0.56
SYP-208ENST00000494396 GUCY1A2P33402 732 aa18.57■□□□□ 0.56
SYP-208ENST00000494396 IFIT1BQ5T764 474 aaKnown RBP18.57■□□□□ 0.56
SYP-208ENST00000494396 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
SYP-208ENST00000494396 DIS3L2Q8IYB7 885 aaKnown RBP18.57■□□□□ 0.56
SYP-208ENST00000494396 DAGLAQ9Y4D2 1042 aa18.57■□□□□ 0.56
SYP-208ENST00000494396 ROBO3Q96MS0 1386 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 ANO9A1A5B4 782 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 PHACTR2O75167 634 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 DEXIO95424 95 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
SYP-208ENST00000494396 RHBDL3P58872 404 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 WWC2Q6AWC2 1192 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 SUPT20HQ8NEM7 779 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 FERMT2Q96AC1 680 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 TAOK2Q9UL54 1235 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 ERLIN2O94905 339 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 PPFIA1Q13136 1202 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 CATIPQ7Z7H3 387 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 CMTR1Q8N1G2 835 aaKnown RBP18.56■□□□□ 0.56
SYP-208ENST00000494396 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 NAV1Q8NEY1 1877 aa18.56■□□□□ 0.56
SYP-208ENST00000494396 ZC3H4Q9UPT8 1303 aaKnown RBP18.55■□□□□ 0.56
SYP-208ENST00000494396 CDK5RAP2Q96SN8 1893 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 F8W031 263 aaPredicted RBP18.55■□□□□ 0.56
SYP-208ENST00000494396 ERVK-24P63145 666 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 KRT83P78385 493 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 ITIH3Q06033 890 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 CCDC82Q8N4S0 544 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 ACRBPQ8NEB7 543 aa18.55■□□□□ 0.56
SYP-208ENST00000494396 EPN1Q9Y6I3 576 aaPredicted RBP18.55■□□□□ 0.56
SYP-208ENST00000494396 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 BTBD18B2RXH4 712 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 ECE2O60344 883 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 CLSTN1O94985 981 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 AKAP17AQ02040 695 aaKnown RBP18.54■□□□□ 0.56
SYP-208ENST00000494396 MXD3Q9BW11 206 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 RWDD2AQ9UIY3 292 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 FLT1P17948 1338 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 SNED1Q8TER0 1413 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 PPP1R3GB7ZBB8 358 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 GOLGA8KD6RF30 607 aa18.54■□□□□ 0.56
SYP-208ENST00000494396 N4BP3O15049 544 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms