RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PLEKHM2Q8IWE5 1019 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 SMC5Q8IY18 1101 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 TRIM43Q96BQ3 446 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-234ENST00000493923 EVI5LQ96CN4 794 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 PURBQ96QR8 312 aaKnown RBP9.57□□□□□ -0.88
HDAC6-234ENST00000493923 NACAP1Q9BZK3 213 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 UBE2OQ9C0C9 1292 aaKnown RBP9.57□□□□□ -0.88
HDAC6-234ENST00000493923 KATNBL1Q9H079 304 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-234ENST00000493923 HOMER2Q9NSB8 354 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 ANAPC4Q9UJX5 808 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 FEM1BQ9UK73 627 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 GOLGA6L22H0YM25 854 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 RBAK-RBAKDNI3L0D1 243 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 ZBED4O75132 1171 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 FGRP09769 529 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 HSPD1P10809 573 aaKnown RBP9.56□□□□□ -0.88
HDAC6-234ENST00000493923 NOVP48745 357 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 RBM25P49756 843 aaKnown RBP9.56□□□□□ -0.88
HDAC6-234ENST00000493923 HMGN5P82970 282 aaKnown RBP9.56□□□□□ -0.88
HDAC6-234ENST00000493923 TLE2Q04725 743 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 PDE4BQ07343 736 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 SNX17Q15036 470 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 MUM1L1Q5H9M0 696 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 C9orf50Q5SZB4 431 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 CCDC174Q6PII3 467 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC6-234ENST00000493923 TDHQ8IZJ6 230 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 GMCL1Q96IK5 515 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 IL25Q9H293 177 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 SLKQ9H2G2 1235 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-234ENST00000493923 XPNPEP3Q9NQH7 507 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 PDLIM7Q9NR12 457 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 HELLSQ9NRZ9 838 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 PHF24Q9UPV7 400 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 DIS3Q9Y2L1 958 aaKnown RBP9.56□□□□□ -0.88
HDAC6-234ENST00000493923 SYNRGQ9UMZ2 1314 aa9.56□□□□□ -0.88
HDAC6-234ENST00000493923 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 KBTBD13C9JR72 458 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 CTAGE5O15320 804 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 ORC4O43929 436 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 RANBP6O60518 1105 aaKnown RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 SLC16A2P36021 539 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 EPHB4P54760 987 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 LRRFIP1Q32MZ4 808 aaKnown RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 MCMDC2Q4G0Z9 681 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 RRP12Q5JTH9 1297 aaKnown RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 CCSAPQ6IQ19 270 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 RCSD1Q6JBY9 416 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 MAMDC4Q6UXC1 1216 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 ARRDC4Q8NCT1 418 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 KLHDC9Q8NEP7 349 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 STAG1Q8WVM7 1258 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 RILPL2Q969X0 211 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 DDX11Q96FC9 970 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 TBC1D32Q96NH3 1257 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 TSPYL1Q9H0U9 437 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 A1CFQ9NQ94 594 aaKnown RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 RNF146Q9NTX7 359 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 SLC5A4Q9NY91 659 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 PRR12Q9ULL5 1215 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 STX8Q9UNK0 236 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 MYO9BQ13459 2157 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 NEDD4P46934 1319 aa9.55□□□□□ -0.88
HDAC6-234ENST00000493923 FRMPD2Q68DX3 1309 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-234ENST00000493923 EYSQ5T1H1 3165 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 A0A1W2PQ45 241 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-234ENST00000493923 A0A1W2PQY0 241 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 TSPY2A6NKD2 308 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 TRIM6-TRIM34B2RNG4 842 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 RARBP10826 455 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 SDSP20132 328 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 COPB2P35606 906 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 SLC1A4P43007 532 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 NASPP49321 788 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-234ENST00000493923 NUCB1Q02818 461 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 ACVR2BQ13705 512 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 SHHQ15465 462 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 LRIT3Q3SXY7 679 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 ARMCX2Q7L311 632 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 CHD1LQ86WJ1 897 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 CCDC144CPQ8IYA2 1237 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 ANKRD35Q8N283 1001 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 FAM133AQ8N9E0 248 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 BADQ92934 168 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 TMEM47Q9BQJ4 181 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 CPVLQ9H3G5 476 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 ZNF287Q9HBT7 754 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 PRDM5Q9NQX1 630 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-234ENST00000493923 PDGFCQ9NRA1 345 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 NRBP1Q9UHY1 535 aa9.54□□□□□ -0.88
HDAC6-234ENST00000493923 NOL7Q9UMY1 257 aaKnown RBP9.54□□□□□ -0.88
HDAC6-234ENST00000493923 CDH23Q9H251 3354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms