RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 PYGMP11217 842 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 TTLL4Q14679 1199 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 BRD3Q15059 726 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 NTRK3Q16288 839 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 RGL3Q3MIN7 710 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 NOL9Q5SY16 702 aaKnown RBP5.79□□□□□ -1.48
GTF3A-208ENST00000493903 SLC35F1Q5T1Q4 408 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 STYK1Q6J9G0 422 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 CXorf57Q6NSI4 855 aaKnown RBP5.79□□□□□ -1.48
GTF3A-208ENST00000493903 PPP4R4Q6NUP7 873 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 DDX53Q86TM3 631 aaKnown RBP5.79□□□□□ -1.48
GTF3A-208ENST00000493903 SMG8Q8ND04 991 aaKnown RBP5.79□□□□□ -1.48
GTF3A-208ENST00000493903 DNAJB8Q8NHS0 232 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 ISL2Q96A47 359 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 KREMEN1Q96MU8 473 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 TRIM8Q9BZR9 551 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 AKTIPQ9H8T0 292 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 CYP4F12Q9HCS2 524 aa5.79□□□□□ -1.48
GTF3A-208ENST00000493903 CRTAMO95727 393 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 SNRPB2P08579 225 aaKnown RBP5.78□□□□□ -1.48
GTF3A-208ENST00000493903 ADH5P11766 374 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 KCNJ6P48051 423 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 ZNF445P59923 1031 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 SART3Q15020 963 aaKnown RBP5.78□□□□□ -1.48
GTF3A-208ENST00000493903 DUOXA2Q1HG44 320 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 NUTM2GQ5VZR2 741 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 RSPO2Q6UXX9 243 aaPredicted RBP5.78□□□□□ -1.48
GTF3A-208ENST00000493903 ACAD11Q709F0 780 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.78□□□□□ -1.48
GTF3A-208ENST00000493903 DGKHQ86XP1 1220 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 TMEM130Q8N3G9 435 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 TMEM145Q8NBT3 493 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 ADCY4Q8NFM4 1077 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 RNF141Q8WVD5 230 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 ZFYVE21Q9BQ24 234 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 RHOBTB2Q9BYZ6 727 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 PIDD1Q9HB75 910 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 TCF7L1Q9HCS4 588 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 LUC7LQ9NQ29 371 aaKnown RBP5.78□□□□□ -1.48
GTF3A-208ENST00000493903 AP4E1Q9UPM8 1137 aa5.78□□□□□ -1.48
GTF3A-208ENST00000493903 TNKSO95271 1327 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 BLACEA4D250 179 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 CBX4O00257 560 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 F2P00734 622 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 ZSCAN20P17040 1043 aaPredicted RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 OCRLQ01968 901 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SOX4Q06945 474 aaPredicted RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SAFB2Q14151 953 aaKnown RBP eCLIP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SF1Q15637 639 aaKnown RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 NBPF9Q3BBW0 867 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 C4orf46Q504U0 113 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SYCP2LQ5T4T6 812 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 PIK3R6Q5UE93 754 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 KIAA1211Q6ZU35 1233 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 ARMCX6Q7L4S7 300 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 JPH3Q8WXH2 748 aaPredicted RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 MEGF10Q96KG7 1140 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 MPHOSPH6Q99547 160 aaKnown RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SSBP4Q9BWG4 385 aaPredicted RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SLC13A1Q9BZW2 595 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 UBA5Q9GZZ9 404 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 RNF208Q9H0X6 261 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SAMD15Q9P1V8 674 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 FBXL21Q9UKT6 434 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 PCOLCE2Q9UKZ9 415 aa5.77□□□□□ -1.49
GTF3A-208ENST00000493903 SF3B6Q9Y3B4 125 aaKnown RBP5.77□□□□□ -1.49
GTF3A-208ENST00000493903 RNGTTO60942 597 aaKnown RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 ULK1O75385 1050 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 LDHAP00338 332 aaKnown RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 GLB1P16278 677 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 KCNA6P17658 529 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 ITIH2P19823 946 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 ETV3P41162 512 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 PURAQ00577 322 aaKnown RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 AMPD2Q01433 879 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 DSG1Q02413 1049 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 USP53Q70EK8 1073 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 UBE3DQ7Z6J8 389 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 SMYD4Q8IYR2 804 aaPredicted RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 FIBCD1Q8N539 461 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 SMC1BQ8NDV3 1235 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 COG1Q8WTW3 980 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 BRF1Q92994 677 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 NOL6Q9H6R4 1146 aaKnown RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 SSU72Q9NP77 194 aaKnown RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 CRTAC1Q9NQ79 661 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 PRDM11Q9NQV5 511 aa5.76□□□□□ -1.49
GTF3A-208ENST00000493903 PNMA8BQ9ULN7 279 aaPredicted RBP5.76□□□□□ -1.49
GTF3A-208ENST00000493903 IFRD1O00458 451 aaPredicted RBP5.75□□□□□ -1.49
GTF3A-208ENST00000493903 PRKD3O94806 890 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 TIAF1O95411 115 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 ECI1P42126 302 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 ID4P47928 161 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 LSSP48449 732 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 IL2P60568 153 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 KRT85P78386 507 aa5.75□□□□□ -1.49
GTF3A-208ENST00000493903 GUCY1A3Q02108 690 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms