RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 PQBP1O60828 265 aaKnown RBP27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 KCNA10Q16322 511 aa27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 CCSAPQ6IQ19 270 aaPredicted RBP27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 SH3RF1Q7Z6J0 888 aa27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 PCSK9Q8NBP7 692 aaKnown RBP27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 BADQ92934 168 aa27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 TRIM43Q96BQ3 446 aaPredicted RBP27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 UPF3AQ9H1J1 476 aaKnown RBP27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
RHBDD3-206ENST00000493894 GJA9P57773 515 aa27.84■■■□□ 2.05
RHBDD3-206ENST00000493894 DEFB123Q8N688 67 aa27.84■■■□□ 2.05
RHBDD3-206ENST00000493894 GLT1D1Q96MS3 346 aa27.84■■■□□ 2.05
RHBDD3-206ENST00000493894 DSCC1Q9BVC3 393 aa27.83■■■□□ 2.05
RHBDD3-206ENST00000493894 TNFAIP2Q03169 654 aa27.82■■■□□ 2.04
RHBDD3-206ENST00000493894 ZNF543Q08ER8 600 aa27.82■■■□□ 2.04
RHBDD3-206ENST00000493894 ANKRD33Q7Z3H0 272 aa27.82■■■□□ 2.04
RHBDD3-206ENST00000493894 ZKSCAN3Q9BRR0 538 aa27.82■■■□□ 2.04
RHBDD3-206ENST00000493894 PNMA2Q9UL42 364 aa27.82■■■□□ 2.04
RHBDD3-206ENST00000493894 ASTN1O14525 1302 aa27.82■■■□□ 2.04
RHBDD3-206ENST00000493894 LCTP09848 1927 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 DCDC2CA8MYV0 355 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 ASGR1P07306 291 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 SNHG28P0DPA3 235 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 IRX5P78411 483 aaPredicted RBP27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 GNASQ5JWF2 1037 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 NOL8Q76FK4 1167 aaKnown RBP27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 Q7L0L9 218 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 IQCA1Q86XH1 822 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 DGKHQ86XP1 1220 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 TOX2Q96NM4 488 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 ELP1O95163 1332 aa27.81■■■□□ 2.04
RHBDD3-206ENST00000493894 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 KIAA0355O15063 1070 aa27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 IMMTQ16891 758 aaKnown RBP27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 CCDC178Q5BJE1 867 aa27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 GPATCH4Q5T3I0 446 aaKnown RBP27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 TMEM39AQ9NV64 488 aa27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 MROH7Q68CQ1 1323 aa27.8■■■□□ 2.04
RHBDD3-206ENST00000493894 NFIBO00712 420 aa27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 KDM4AO75164 1064 aa27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 RAG1P15918 1043 aa27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 TLK2Q86UE8 772 aa27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 FBXO16Q8IX29 292 aaPredicted RBP27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 ADD3Q9UEY8 706 aaKnown RBP27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 CTNNA3Q9UI47 895 aa27.79■■■□□ 2.04
RHBDD3-206ENST00000493894 WDR19Q8NEZ3 1342 aa27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 NKX3-2P78367 333 aa27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 BAATQ14032 418 aaPredicted RBP27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 SHHQ15465 462 aa27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 EEPD1Q7L9B9 569 aa27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 VTI1AQ96AJ9 217 aa27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 VTA1Q9NP79 307 aa27.78■■■□□ 2.04
RHBDD3-206ENST00000493894 A0A0U1RQG5 324 aaPredicted RBP27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 PTPDC1A2A3K4 754 aa27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 ITGB8P26012 769 aa27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 FAAP100Q0VG06 881 aa27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 C9orf50Q5SZB4 431 aa27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 PNMA1Q8ND90 353 aa27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 KAT14Q9H8E8 782 aa27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 GNEQ9Y223 722 aaKnown RBP27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 DDX49Q9Y6V7 483 aaKnown RBP27.77■■■□□ 2.04
RHBDD3-206ENST00000493894 LOC102724159A0A0B4J2E5 919 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 B4E1Z4 1266 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 CTAGE5O15320 804 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 PDE4AP27815 886 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 ALDH5A1P51649 535 aaPredicted RBP27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 BEX3Q00994 111 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 PWP2Q15269 919 aaKnown RBP27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 TTC22Q5TAA0 569 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 MORC4Q8TE76 937 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 PURBQ96QR8 312 aaKnown RBP27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 AP5M1Q9H0R1 490 aa27.76■■■□□ 2.03
RHBDD3-206ENST00000493894 GOLGA8HP0CJ92 632 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 SMPD1P17405 629 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 IQSEC1Q6DN90 963 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 SLC30A10Q6XR72 485 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 ZSCAN10Q96SZ4 725 aaPredicted RBP27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 KRT23Q9C075 422 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 CNNM2Q9H8M5 875 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 PDGFCQ9NRA1 345 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 MTMR10Q9NXD2 777 aa27.75■■■□□ 2.03
RHBDD3-206ENST00000493894 RAD50Q92878 1312 aa27.74■■■□□ 2.03
RHBDD3-206ENST00000493894 GSPT1P15170 499 aaKnown RBP27.74■■■□□ 2.03
RHBDD3-206ENST00000493894 FPGSQ05932 587 aa27.74■■■□□ 2.03
RHBDD3-206ENST00000493894 TAPT1Q6NXT6 567 aa27.74■■■□□ 2.03
RHBDD3-206ENST00000493894 RNF207Q6ZRF8 634 aa27.74■■■□□ 2.03
RHBDD3-206ENST00000493894 CLEC4DQ8WXI8 215 aa27.74■■■□□ 2.03
RHBDD3-206ENST00000493894 TNKSO95271 1327 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 ARVCFO00192 962 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 CALML3P27482 149 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 CDK7P50613 346 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 FSCN1Q16658 493 aaKnown RBP27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 ANKS1AQ92625 1134 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 IL25Q9H293 177 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 TBX21Q9UL17 535 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 Q9Y3F1 56 aa27.73■■■□□ 2.03
RHBDD3-206ENST00000493894 TLR3O15455 904 aaKnown RBP27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 DYNC1LI2O43237 492 aaPredicted RBP27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 ZEB2O60315 1214 aa27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 CABYRO75952 493 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms