RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TCP10Q12799 353 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 CUL4BQ13620 913 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 LETM2Q2VYF4 491 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 KLHL10Q6JEL2 608 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 ZNF397Q8NF99 534 aaPredicted RBP15.53■□□□□ 0.08
VCP-207ENST00000493886 DISC1Q9NRI5 854 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 SAMSN1Q9NSI8 373 aaKnown RBP15.53■□□□□ 0.08
VCP-207ENST00000493886 NRDCO43847 1150 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 STAT6P42226 847 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 EZH2Q15910 746 aaKnown RBP15.53■□□□□ 0.08
VCP-207ENST00000493886 NEK8Q86SG6 692 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 SMYD4Q8IYR2 804 aaPredicted RBP15.53■□□□□ 0.08
VCP-207ENST00000493886 REXO1Q8N1G1 1221 aaKnown RBP15.53■□□□□ 0.08
VCP-207ENST00000493886 CCDC17Q96LX7 622 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 DNAJC18Q9H819 358 aa15.53■□□□□ 0.08
VCP-207ENST00000493886 GREB1LQ9C091 1923 aaPredicted RBP15.52■□□□□ 0.08
VCP-207ENST00000493886 PP2D1A8MPX8 630 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 PPP1R3GB7ZBB8 358 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 CCNT1O60563 726 aaKnown RBP15.52■□□□□ 0.08
VCP-207ENST00000493886 ATP2B2Q01814 1243 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 AOC3Q16853 763 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 COA7Q96BR5 231 aa15.52■□□□□ 0.08
VCP-207ENST00000493886 DHX36Q9H2U1 1008 aaKnown RBP15.52■□□□□ 0.08
VCP-207ENST00000493886 BIN2Q9UBW5 565 aaPredicted RBP15.52■□□□□ 0.08
VCP-207ENST00000493886 SYNRGQ9UMZ2 1314 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 UBA7P41226 1012 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 SPATA1Q5VX52 437 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 TBCKQ8TEA7 893 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 IDI2Q9BXS1 227 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 CCSER1Q9C0I3 900 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 FAM198AQ9UFP1 575 aa15.52■□□□□ 0.07
VCP-207ENST00000493886 OR52Z1P0C646 297 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 STX17P56962 302 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 ZNF771Q7L3S4 317 aaPredicted RBP15.51■□□□□ 0.07
VCP-207ENST00000493886 RASSF8Q8NHQ8 419 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 STK32BQ9NY57 414 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
VCP-207ENST00000493886 MYH4Q9Y623 1939 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 DDTLA6NHG4 134 aaPredicted RBP15.51■□□□□ 0.07
VCP-207ENST00000493886 EN1Q05925 392 aaPredicted RBP15.51■□□□□ 0.07
VCP-207ENST00000493886 NAALADL2Q58DX5 795 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 RRAGBQ5VZM2 374 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 JMJD4Q9H9V9 463 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 KCND1Q9NSA2 647 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 TMEM260Q9NX78 707 aa15.51■□□□□ 0.07
VCP-207ENST00000493886 ADCY7P51828 1080 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 GPATCH4Q5T3I0 446 aaKnown RBP15.5■□□□□ 0.07
VCP-207ENST00000493886 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 CAMKK2Q96RR4 588 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 PI4KBQ9UBF8 816 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 SERPINA10Q9UK55 444 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 PNMA6FA0A0J9YX94 578 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 FAM196BA6NMK8 535 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 FANCGO15287 622 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 IRF6O14896 467 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 RPN1P04843 607 aaKnown RBP15.5■□□□□ 0.07
VCP-207ENST00000493886 SH3BP5LQ7L8J4 393 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 EGFL6Q8IUX8 553 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
VCP-207ENST00000493886 AK8Q96MA6 479 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 RMND1Q9NWS8 449 aa15.5■□□□□ 0.07
VCP-207ENST00000493886 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 URI1O94763 535 aaPredicted RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 ADKP55263 362 aaKnown RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 CC2D2BQ6DHV5 1058 aa15.49■□□□□ 0.07
VCP-207ENST00000493886 ZNF526Q8TF50 670 aaPredicted RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 CTNND2Q9UQB3 1225 aa15.49■□□□□ 0.07
VCP-207ENST00000493886 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 KIF2AO00139 706 aaPredicted RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 KCNJ6P48051 423 aa15.49■□□□□ 0.07
VCP-207ENST00000493886 CERKLQ49MI3 558 aaPredicted RBP15.49■□□□□ 0.07
VCP-207ENST00000493886 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
VCP-207ENST00000493886 EPC1Q9H2F5 836 aa15.49■□□□□ 0.07
VCP-207ENST00000493886 ZNF446Q9NWS9 450 aa15.49■□□□□ 0.07
VCP-207ENST00000493886 CLSTN1O94985 981 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 KCNA4P22459 653 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 SLC16A2P36021 539 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 ARHGAP29Q52LW3 1261 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 ZNF658Q5TYW1 1059 aaPredicted RBP15.48■□□□□ 0.07
VCP-207ENST00000493886 PPP1R18Q6NYC8 613 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 SUPT20HQ8NEM7 779 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 PLIN2Q99541 437 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.48■□□□□ 0.071e-6■□□□□ 10.9
VCP-207ENST00000493886 A0A1B0GTH6 734 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 PPP1R11O60927 126 aaPredicted RBP15.48■□□□□ 0.07
VCP-207ENST00000493886 ETF1P62495 437 aaKnown RBP15.48■□□□□ 0.07
VCP-207ENST00000493886 NR1I3Q14994 352 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 SHROOM1Q2M3G4 852 aaPredicted RBP15.48■□□□□ 0.07
VCP-207ENST00000493886 CDKAL1Q5VV42 579 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 CABP7Q86V35 215 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 BANK1Q8NDB2 785 aa15.48■□□□□ 0.07
VCP-207ENST00000493886 USP17L10C9JJH3 530 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 PPIP5K2O43314 1243 aa15.47■□□□□ 0.07
VCP-207ENST00000493886 EEF2P13639 858 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms