RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 ATP8A2Q9NTI2 1148 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 HOXC10Q9NYD6 342 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 SWAP70Q9UH65 585 aa9.07□□□□□ -0.96
RBM39-238ENST00000493853 PDE4DIPQ5VU43 2346 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 DOCK2Q92608 1830 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 TTLL8A6PVC2 850 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 PEX10O60683 326 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 MBD4O95243 580 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
RBM39-238ENST00000493853 ZKSCAN1P17029 563 aaPredicted RBP9.06□□□□□ -0.96
RBM39-238ENST00000493853 VCAM1P19320 739 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 SHMT1P34896 483 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
RBM39-238ENST00000493853 SEPT2Q15019 361 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 CATSPERGQ6ZRH7 1159 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 GPR142Q7Z601 462 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 LCORLQ8N3X6 602 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 ACER1Q8TDN7 264 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 EDC3Q96F86 508 aaKnown RBP9.06□□□□□ -0.96
RBM39-238ENST00000493853 C12orf42Q96LP6 360 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 PORCNQ9H237 461 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 RPAP3Q9H6T3 665 aaPredicted RBP9.06□□□□□ -0.96
RBM39-238ENST00000493853 SH2D4AQ9H788 454 aa9.06□□□□□ -0.96
RBM39-238ENST00000493853 CENPFP49454 3210 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 TCRBV5S4A2TA0A5A2 114 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 ADD2P35612 726 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 COG2Q14746 738 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 C20orf194Q5TEA3 1177 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 MFSD14CQ5VZR4 134 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 TMEM179Q6ZVK1 233 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 UBE2Q1Q7Z7E8 422 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 TRIB2Q92519 343 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 ZNF592Q92610 1267 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 DYNLL2Q96FJ2 89 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 CCDC17Q96LX7 622 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 HAUS7Q99871 368 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 TANGO6Q9C0B7 1094 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 DNMT3LQ9UJW3 386 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 SLC4A4Q9Y6R1 1079 aa9.05□□□□□ -0.96
RBM39-238ENST00000493853 DOCK1Q14185 1865 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 KIAA0100Q14667 2235 aaKnown RBP9.04□□□□□ -0.96
RBM39-238ENST00000493853 SLC15A5A6NIM6 579 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 USP17L12C9JPN9 530 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 USP17L21D6R901 530 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 SPINT1O43278 529 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 PRKAB2O43741 272 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 RAD21O60216 631 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 SMARCA5O60264 1052 aaPredicted RBP9.04□□□□□ -0.96
RBM39-238ENST00000493853 CYP2D6P10635 497 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 ICA1Q05084 483 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 GABPAQ06546 454 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 PLS1Q14651 629 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 UBE3CQ15386 1083 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 LRRFIP1Q32MZ4 808 aaKnown RBP9.04□□□□□ -0.96
RBM39-238ENST00000493853 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 DPP9Q86TI2 863 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 APBA2Q99767 749 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
RBM39-238ENST00000493853 CYLDQ9NQC7 956 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 ECHDC1Q9NTX5 307 aa9.04□□□□□ -0.96
RBM39-238ENST00000493853 H3BM21 787 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 GPR37L1O60883 481 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 LILRA1O75019 489 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 CNGA1P29973 690 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
RBM39-238ENST00000493853 CDK8P49336 464 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 CACNB2Q08289 660 aaPredicted RBP9.03□□□□□ -0.96
RBM39-238ENST00000493853 CCL14Q16627 93 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.96
RBM39-238ENST00000493853 SLFNL1Q499Z3 407 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 LBX2Q6XYB7 198 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 SLC44A5Q8NCS7 719 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 LPAR1Q92633 364 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 IRF7Q92985 503 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 C11orf49Q9H6J7 331 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 SLC5A4Q9NY91 659 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 ZSWIM8A7E2V4 1837 aa9.03□□□□□ -0.96
RBM39-238ENST00000493853 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.96
RBM39-238ENST00000493853 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 A0A1W2PRG0 241 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 STRNO43815 780 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 CNMDO75829 334 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 FLOT1O75955 427 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 APPP05067 770 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 ADH1AP07327 375 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 FXR1P51114 621 aaKnown RBP eCLIP9.02□□□□□ -0.97
RBM39-238ENST00000493853 MAP3K21Q5TCX8 1036 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 C7orf61Q8IZ16 206 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 SPICE1Q8N0Z3 855 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 MB21D1Q8N884 522 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 DIS3LQ8TF46 1054 aaKnown RBP9.02□□□□□ -0.97
RBM39-238ENST00000493853 USP6NLQ92738 828 aa9.02□□□□□ -0.97
RBM39-238ENST00000493853 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms