RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 E9PSI1 815 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 H3BRB1 525 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 SOX1O00570 391 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-218ENST00000493726 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.86
LRCH3-218ENST00000493726 GPSM2P81274 684 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 NEXNQ0ZGT2 675 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 USP50Q70EL3 339 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-218ENST00000493726 NIM1KQ8IY84 436 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 TBC1D16Q8TBP0 767 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 BSNDQ8WZ55 320 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 DPF2Q92785 391 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 WNT8BQ93098 351 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 FAM46AQ96IP4 442 aaKnown RBP9.65□□□□□ -0.86
LRCH3-218ENST00000493726 TUT1Q9H6E5 874 aaKnown RBP9.65□□□□□ -0.86
LRCH3-218ENST00000493726 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 OSGEPQ9NPF4 335 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 BSDC1Q9NW68 430 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-218ENST00000493726 GPRC5DQ9NZD1 345 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 USTQ9Y2C2 406 aa9.65□□□□□ -0.86
LRCH3-218ENST00000493726 A0A1B0GUL6 1792 aa9.65□□□□□ -0.87
LRCH3-218ENST00000493726 THSD7BQ9C0I4 1608 aa9.64□□□□□ -0.87
LRCH3-218ENST00000493726 IRS2Q9Y4H2 1338 aa9.64□□□□□ -0.87
LRCH3-218ENST00000493726 DHX15O43143 795 aaKnown RBP9.64□□□□□ -0.87
LRCH3-218ENST00000493726 ICMTO60725 284 aa9.64□□□□□ -0.87
LRCH3-218ENST00000493726 FOXO4P98177 505 aa9.64□□□□□ -0.87
LRCH3-218ENST00000493726 C19orf57Q0VDD7 668 aa9.64□□□□□ -0.87
LRCH3-218ENST00000493726 IKBKEQ14164 716 aa9.64□□□□□ -0.87
LRCH3-218ENST00000493726 TMX4Q9H1E5 349 aaPredicted RBP9.64□□□□□ -0.87
LRCH3-218ENST00000493726 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
LRCH3-218ENST00000493726 ALDH1L1O75891 902 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
LRCH3-218ENST00000493726 SSTR4P31391 388 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 EPS15P42566 896 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 PREPP48147 710 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 ECM1Q16610 540 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 CIAPIN1Q6FI81 312 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 UBE3BQ7Z3V4 1068 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 GREM2Q9H772 168 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
LRCH3-218ENST00000493726 XDHP47989 1333 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 HMX2A2RU54 273 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 VIL1P09327 827 aaKnown RBP9.62□□□□□ -0.87
LRCH3-218ENST00000493726 RPS12P25398 132 aaKnown RBP9.62□□□□□ -0.87
LRCH3-218ENST00000493726 ARL4DP49703 201 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 TNIP1Q15025 636 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 ALDH1L2Q3SY69 923 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 C15orf52Q6ZUT6 534 aaKnown RBP9.62□□□□□ -0.87
LRCH3-218ENST00000493726 GLYCTKQ8IVS8 523 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 KAZALD1Q96I82 304 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 MYRFLQ96LU7 910 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 GMLQ99445 158 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 CDC5LQ99459 802 aaKnown RBP9.62□□□□□ -0.87
LRCH3-218ENST00000493726 EYA3Q99504 573 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 ADARB2Q9NS39 739 aaKnown RBP9.62□□□□□ -0.87
LRCH3-218ENST00000493726 MINPP1Q9UNW1 487 aa9.62□□□□□ -0.87
LRCH3-218ENST00000493726 PTPRCP08575 1304 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
LRCH3-218ENST00000493726 GMPSP49915 693 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-218ENST00000493726 ANKRD18AQ8IVF6 992 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 JARID2Q92833 1246 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-218ENST00000493726 USP26Q9BXU7 913 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 BHLHE41Q9C0J9 482 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-218ENST00000493726 RNF208Q9H0X6 261 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 EGFL7Q9UHF1 273 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 TNRC18O15417 2968 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-218ENST00000493726 CNTNAP1P78357 1384 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 SPEF2Q9C093 1822 aa9.61□□□□□ -0.87
LRCH3-218ENST00000493726 RASSF10A6NK89 507 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 F6X3S4 739 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 GRM8O00222 908 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 PSMD14O00487 310 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 ECE2O60344 883 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 TGFB1P01137 390 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 BMP3P12645 472 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-218ENST00000493726 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 RABL6Q3YEC7 729 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-218ENST00000493726 CNTROBQ8N137 903 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 SSH1Q8WYL5 1049 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 KCNF1Q9H3M0 494 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 BRPF3Q9ULD4 1205 aa9.6□□□□□ -0.87
LRCH3-218ENST00000493726 TRPM7Q96QT4 1865 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 WTIPA6NIX2 430 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-218ENST00000493726 FOXN1O15353 648 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 RAD17O75943 681 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 DLGAP3O95886 979 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 ESRRAP11474 423 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-218ENST00000493726 MMP14P50281 582 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 EPHA10Q5JZY3 1008 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 ANKRD34AQ69YU3 496 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 FDX2Q6P4F2 183 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 KCNQ5Q9NR82 932 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 LEMD3Q9Y2U8 911 aa9.59□□□□□ -0.87
LRCH3-218ENST00000493726 UFL1O94874 794 aa9.58□□□□□ -0.88
LRCH3-218ENST00000493726 CCT4P50991 539 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms