RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 DBHP09172 617 aa7.49□□□□□ -1.21
SMC4-223ENST00000493695 CYP2R1Q6VVX0 501 aa7.49□□□□□ -1.21
SMC4-223ENST00000493695 FRMD5Q7Z6J6 570 aa7.49□□□□□ -1.21
SMC4-223ENST00000493695 SLITRK4Q8IW52 837 aa7.49□□□□□ -1.21
SMC4-223ENST00000493695 TMEM87AQ8NBN3 555 aa7.49□□□□□ -1.21
SMC4-223ENST00000493695 ZDHHC15Q96MV8 337 aa7.49□□□□□ -1.21
SMC4-223ENST00000493695 FFAR3O14843 346 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 TBC1D8O95759 1140 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 CYBBP04839 570 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 ACRP10323 421 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 PMS1P54277 932 aaKnown RBP7.48□□□□□ -1.21
SMC4-223ENST00000493695 SLURP1P55000 103 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 UBXN11Q5T124 520 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 FIBCD1Q8N539 461 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 BORCS6Q96GS4 357 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 NOL6Q9H6R4 1146 aaKnown RBP7.48□□□□□ -1.21
SMC4-223ENST00000493695 PDLIM7Q9NR12 457 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
SMC4-223ENST00000493695 PMF1-BGLAPU3KQ54 211 aa7.48□□□□□ -1.21
SMC4-223ENST00000493695 A0A1B0GTL3 188 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 ADRB1P08588 477 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 CEBPAP49715 358 aaPredicted RBP7.47□□□□□ -1.21
SMC4-223ENST00000493695 ZNF445P59923 1031 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 PRR5P85299 388 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 FOXO4P98177 505 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 PPP2R5DQ14738 602 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 AXDND1Q5T1B0 1012 aaPredicted RBP7.47□□□□□ -1.21
SMC4-223ENST00000493695 INTS3Q68E01 1043 aaKnown RBP7.47□□□□□ -1.21
SMC4-223ENST00000493695 GGNQ86UU5 652 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 TP53I13Q8NBR0 393 aaPredicted RBP7.47□□□□□ -1.21
SMC4-223ENST00000493695 SMARCC1Q92922 1105 aaPredicted RBP7.47□□□□□ -1.21
SMC4-223ENST00000493695 GP6Q9HCN6 339 aa7.47□□□□□ -1.21
SMC4-223ENST00000493695 SHOXO15266 292 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 IMPDH2P12268 514 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 ITGA4P13612 1032 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 POU4F1Q01851 419 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 RTP5Q14D33 572 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 NT5DC1Q5TFE4 455 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 CABP7Q86V35 215 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 ALG3Q92685 438 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 SPATA25Q9BR10 227 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 RXFP1Q9HBX9 757 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 ZNRF3Q9ULT6 936 aa7.46□□□□□ -1.22
SMC4-223ENST00000493695 FGF10O15520 208 aaPredicted RBP7.45□□□□□ -1.22
SMC4-223ENST00000493695 IFNGR1P15260 489 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 IGFBP6P24592 240 aaPredicted RBP7.45□□□□□ -1.22
SMC4-223ENST00000493695 L1CAMP32004 1257 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 FERMT3Q86UX7 667 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 RNF34Q969K3 372 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 PTCHD1Q96NR3 888 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 FCRL3Q96P31 734 aaPredicted RBP7.45□□□□□ -1.22
SMC4-223ENST00000493695 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
SMC4-223ENST00000493695 PRICKLE3O43900 615 aaPredicted RBP7.44□□□□□ -1.22
SMC4-223ENST00000493695 NCAM1P13591 858 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 CD247P20963 164 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 MC3RP41968 323 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 ADCY4Q8NFM4 1077 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 TM9SF2Q99805 663 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 ZNF451Q9Y4E5 1061 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 FHOD1Q9Y613 1164 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 IRS2Q9Y4H2 1338 aa7.44□□□□□ -1.22
SMC4-223ENST00000493695 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 ATF2P15336 505 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
SMC4-223ENST00000493695 ZYXQ15942 572 aaKnown RBP7.43□□□□□ -1.22
SMC4-223ENST00000493695 SPATS1Q496A3 300 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 UNC5AQ6ZN44 842 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 RUFY4Q6ZNE9 571 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 USP33Q8TEY7 942 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 FNIP1Q8TF40 1166 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 DDX1Q92499 740 aaKnown RBP7.43□□□□□ -1.22
SMC4-223ENST00000493695 BCAS3Q9H6U6 928 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 PPT2Q9UMR5 302 aa7.43□□□□□ -1.22
SMC4-223ENST00000493695 K7ESM1 405 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 PLA2G1BP04054 148 aaKnown RBP7.42□□□□□ -1.22
SMC4-223ENST00000493695 GUCY2CP25092 1073 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 ZNF76P36508 570 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 NFKB2Q00653 900 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 ADAT2Q7Z6V5 191 aaKnown RBP7.42□□□□□ -1.22
SMC4-223ENST00000493695 ZNF526Q8TF50 670 aaPredicted RBP7.42□□□□□ -1.22
SMC4-223ENST00000493695 GPR20Q99678 358 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 RWDD3Q9Y3V2 267 aa7.42□□□□□ -1.22
SMC4-223ENST00000493695 INSRRP14616 1297 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 PUM1Q14671 1186 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMC4-223ENST00000493695 DPY19L1Q2PZI1 675 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 ZXDCQ2QGD7 858 aaPredicted RBP7.41□□□□□ -1.22
SMC4-223ENST00000493695 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 LIPIQ6XZB0 460 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 CRBNQ96SW2 442 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 RNF38Q9H0F5 515 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 PCDHGB7Q9Y5F8 929 aa7.41□□□□□ -1.22
SMC4-223ENST00000493695 ASGR2P07307 311 aa7.4□□□□□ -1.22
SMC4-223ENST00000493695 CORO7P57737 925 aa7.4□□□□□ -1.22
SMC4-223ENST00000493695 ZNF394Q53GI3 561 aa7.4□□□□□ -1.22
SMC4-223ENST00000493695 STXBP3O00186 592 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 SEPHS1P49903 392 aa7.39□□□□□ -1.23
SMC4-223ENST00000493695 GJA9P57773 515 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms