RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 CDKAL1Q5VV42 579 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 TTBK2Q6IQ55 1244 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 TEX2Q8IWB9 1127 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 MTMR9Q96QG7 549 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 GMLQ99445 158 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 RWDD2AQ9UIY3 292 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 PPP1R11O60927 126 aaPredicted RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 FKBP1CQ5VVH2 108 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 TMEM260Q9NX78 707 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 A0A1B0GTH6 734 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 USP17L10C9JJH3 530 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 CASP1P29466 404 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 SPAG1Q07617 926 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 SEPT2Q15019 361 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 CALCRLQ16602 461 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 PPP1R2P41236 205 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 PAK1Q13153 545 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 PDIA5Q14554 519 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 LARGE2Q8N3Y3 721 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 MTMR14Q8NCE2 650 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 CALML4Q96GE6 196 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
PHACTR4-204ENST00000493669 KIF2AO00139 706 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 CCP110O43303 1012 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 KCNA3P22001 575 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 CDC25AP30304 524 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 AMPD3Q01432 767 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 TBX2Q13207 712 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 SPECC1LQ69YQ0 1117 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 OGFOD1Q8N543 542 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 FAM151AQ8WW52 585 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 CSRNP1Q96S65 589 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 SAMSN1Q9NSI8 373 aaKnown RBP12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 PP2D1A8MPX8 630 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 SLC26A4O43511 780 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 RHOBTB3O94955 611 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 MMP14P50281 582 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 NR1I3Q14994 352 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 DLGAP5Q15398 846 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 QRICH1Q2TAL8 776 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 STAMQ92783 540 aa12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
PHACTR4-204ENST00000493669 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 F5H6K3 240 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 TUBB4AP04350 444 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 UQCRHP07919 91 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 DPEP1P16444 411 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 PLCG1P19174 1290 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 SLC16A2P36021 539 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 KLRC3Q07444 240 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 STIM1Q13586 685 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 FILIP1LQ4L180 1135 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 KLHL10Q6JEL2 608 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 BTNL9Q6UXG8 535 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 FCHSD1Q86WN1 690 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 TMX1Q9H3N1 280 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 PSMD14O00487 310 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 DYNC1I1O14576 645 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 TNNI2P48788 182 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 TRAF1Q13077 416 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 MOXD1Q6UVY6 613 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 ZNF70Q9UC06 446 aaPredicted RBP12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.46
PHACTR4-204ENST00000493669 KLRC4O43908 158 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TECP42680 631 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 APTXQ7Z2E3 356 aaKnown RBP12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 ADSSL1Q8N142 457 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 ANKRD20A12PQ8NF67 263 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 PAXBP1Q9Y5B6 917 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 EDIL3O43854 480 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 TBC1D12O60347 775 aa12.14□□□□□ -0.47
PHACTR4-204ENST00000493669 GDF11O95390 407 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms