RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CDK8P49336 464 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 TMC7Q7Z402 723 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 DNAJB8Q8NHS0 232 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 DPH2Q9BQC3 489 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-212ENST00000493551 SIRT5Q9NXA8 310 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 TJP2Q9UDY2 1190 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 KCNH3Q9ULD8 1083 aa6.55□□□□□ -1.36
CLIP4-212ENST00000493551 BLMP54132 1417 aaPredicted RBP6.55□□□□□ -1.36
CLIP4-212ENST00000493551 ADGRL2O95490 1459 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 GLI3P10071 1580 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 PTCH1Q13635 1447 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 N4BP3O15049 544 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
CLIP4-212ENST00000493551 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
CLIP4-212ENST00000493551 ADGRF1Q5T601 910 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 SLC6A19Q695T7 634 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 DTWD2Q8NBA8 298 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
CLIP4-212ENST00000493551 STK26Q9P289 416 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 USTQ9Y2C2 406 aa6.54□□□□□ -1.36
CLIP4-212ENST00000493551 MYOM2P54296 1465 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 BRWD3Q6RI45 1802 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 GALK1P51570 392 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 FRMD5Q7Z6J6 570 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 TMEM87BQ96K49 555 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 ADAM7Q9H2U9 754 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 CEP131Q9UPN4 1083 aa6.53□□□□□ -1.36
CLIP4-212ENST00000493551 IQGAP3Q86VI3 1631 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 PGRP06401 933 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 EPHB3P54753 998 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 PLP2Q04941 152 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 UNC5CLQ8IV45 518 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 FBF1Q8TES7 1133 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 EPB41L4AQ9HCS5 686 aaPredicted RBP6.52□□□□□ -1.37
CLIP4-212ENST00000493551 EBF1Q9UH73 591 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 MYRFQ9Y2G1 1151 aa6.52□□□□□ -1.37
CLIP4-212ENST00000493551 NPHP3Q7Z494 1330 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 NEXMIFQ5QGS0 1516 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 LRP5O75197 1615 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 CLTCL1P53675 1640 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 GFRA2O00451 464 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 IRS4O14654 1257 aaPredicted RBP6.51□□□□□ -1.37
CLIP4-212ENST00000493551 GIPC1O14908 333 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 INSRRP14616 1297 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 YY1P25490 414 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 DSC3Q14574 896 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 VMACQ2NL98 169 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 OLFML2BQ68BL8 750 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 KRT27Q7Z3Y8 459 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 WAPLQ7Z5K2 1190 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 NLRX1Q86UT6 975 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 LINC01599Q8WXQ3 324 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 PXDNQ92626 1479 aa6.51□□□□□ -1.37
CLIP4-212ENST00000493551 COL22A1Q8NFW1 1626 aaPredicted RBP6.5□□□□□ -1.37
CLIP4-212ENST00000493551 SPHKAPQ2M3C7 1700 aa6.5□□□□□ -1.37
CLIP4-212ENST00000493551 TEKQ02763 1124 aa6.5□□□□□ -1.37
CLIP4-212ENST00000493551 PUM1Q14671 1186 aaKnown RBP eCLIP6.5□□□□□ -1.37
CLIP4-212ENST00000493551 CNKSR3Q6P9H4 555 aa6.5□□□□□ -1.37
CLIP4-212ENST00000493551 CCDC82Q8N4S0 544 aa6.5□□□□□ -1.37
CLIP4-212ENST00000493551 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
CLIP4-212ENST00000493551 CNTD2Q9H8S5 307 aa6.5□□□□□ -1.37
CLIP4-212ENST00000493551 MARF1Q9Y4F3 1742 aaKnown RBP6.5□□□□□ -1.37
CLIP4-212ENST00000493551 PLEKHH1Q9ULM0 1364 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 CILPO75339 1184 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 VIPR1P32241 457 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 PDE4BQ07343 736 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 SAFB2Q14151 953 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLIP4-212ENST00000493551 TTBK2Q6IQ55 1244 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 SV2BQ7L1I2 683 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 MCATQ8IVS2 390 aaKnown RBP6.49□□□□□ -1.37
CLIP4-212ENST00000493551 SIRT2Q8IXJ6 389 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 LINC01356Q8N9X3 169 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 CRTAC1Q9NQ79 661 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 NAIPQ13075 1403 aa6.49□□□□□ -1.37
CLIP4-212ENST00000493551 EP400Q96L91 3159 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 LAMC1P11047 1609 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 NOTOA8MTQ0 251 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 EZH2Q15910 746 aaKnown RBP6.48□□□□□ -1.37
CLIP4-212ENST00000493551 KRT28Q7Z3Y7 464 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 FAM129CQ86XR2 697 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 CYB5D2Q8WUJ1 264 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 GPR20Q99678 358 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 G6PC3Q9BUM1 346 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 CNOT11Q9UKZ1 510 aaKnown RBP6.48□□□□□ -1.37
CLIP4-212ENST00000493551 SLIT2O94813 1529 aa6.48□□□□□ -1.37
CLIP4-212ENST00000493551 USP32Q8NFA0 1604 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 PLCH1Q4KWH8 1693 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 TREHO43280 583 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 EFEMP2O95967 443 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 LMNB1P20700 586 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 TMEFF1Q8IYR6 380 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 MZB1Q8WU39 189 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 RNF141Q8WVD5 230 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 ZNF281Q9Y2X9 895 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 SPATA31A3Q5VYP0 1347 aa6.47□□□□□ -1.37
CLIP4-212ENST00000493551 RBM47A0AV96 593 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms