RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCM2-217ENST00000492883 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.19
CCM2-217ENST00000492883 MTMR8Q96EF0 704 aa16.21■□□□□ 0.19
CCM2-217ENST00000492883 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
CCM2-217ENST00000492883 TMEM106CQ9BVX2 250 aa16.21■□□□□ 0.19
CCM2-217ENST00000492883 AGXT2Q9BYV1 514 aa16.21■□□□□ 0.19
CCM2-217ENST00000492883 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
CCM2-217ENST00000492883 FLRT1Q9NZU1 646 aa16.21■□□□□ 0.19
CCM2-217ENST00000492883 DIS3Q9Y2L1 958 aaKnown RBP16.21■□□□□ 0.19
CCM2-217ENST00000492883 ZSWIM8A7E2V4 1837 aa16.21■□□□□ 0.19
CCM2-217ENST00000492883 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 CCDC196A0A1B0GTZ2 297 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 METAP2P50579 478 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCM2-217ENST00000492883 RCAN1P53805 252 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 TRIM32Q13049 653 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 TRAF1Q13077 416 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 MTFR1Q15390 333 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 OLFML2BQ68BL8 750 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 MAML3Q96JK9 1138 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
CCM2-217ENST00000492883 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
CCM2-217ENST00000492883 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
CCM2-217ENST00000492883 MRPL11Q9Y3B7 192 aaKnown RBP16.2■□□□□ 0.18
CCM2-217ENST00000492883 ABCB11O95342 1321 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 A0A0G2JMZ2 1700 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 DNAJC25-GNG10A0A024R161 153 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 NFIBO00712 420 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 CCL5P13501 91 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 CYP2C19P33261 490 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 BAATQ14032 418 aaPredicted RBP16.19■□□□□ 0.18
CCM2-217ENST00000492883 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
CCM2-217ENST00000492883 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 CLEC4DQ8WXI8 215 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 RNF208Q9H0X6 261 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 HMX1Q9NP08 348 aaPredicted RBP16.19■□□□□ 0.18
CCM2-217ENST00000492883 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 PFASO15067 1338 aa16.19■□□□□ 0.18
CCM2-217ENST00000492883 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
CCM2-217ENST00000492883 CALML3P27482 149 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
CCM2-217ENST00000492883 CDC27P30260 824 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 CACNB2Q08289 660 aaPredicted RBP16.18■□□□□ 0.18
CCM2-217ENST00000492883 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 MCF2L2Q86YR7 1114 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 UNC93B1Q9H1C4 597 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 RPTORQ8N122 1335 aa16.18■□□□□ 0.18
CCM2-217ENST00000492883 PPP1R11O60927 126 aaPredicted RBP16.17■□□□□ 0.18
CCM2-217ENST00000492883 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
CCM2-217ENST00000492883 NEK4P51957 841 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 SOX10P56693 466 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 EVCP57679 992 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 CCT2P78371 535 aaKnown RBP16.17■□□□□ 0.18
CCM2-217ENST00000492883 CNTN2Q02246 1040 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 FAM133AQ8N9E0 248 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 TINF2Q9BSI4 451 aa16.17■□□□□ 0.18
CCM2-217ENST00000492883 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CCM2-217ENST00000492883 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
CCM2-217ENST00000492883 CNGA1P29973 690 aa16.16■□□□□ 0.18
CCM2-217ENST00000492883 RPS6P62753 249 aaKnown RBP16.16■□□□□ 0.18
CCM2-217ENST00000492883 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
CCM2-217ENST00000492883 MSL3Q8N5Y2 521 aaKnown RBP16.16■□□□□ 0.18
CCM2-217ENST00000492883 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
CCM2-217ENST00000492883 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
CCM2-217ENST00000492883 ZNF274Q96GC6 653 aaPredicted RBP16.16■□□□□ 0.18
CCM2-217ENST00000492883 ALDH8A1Q9H2A2 487 aaPredicted RBP16.16■□□□□ 0.18
CCM2-217ENST00000492883 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
CCM2-217ENST00000492883 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 CFBP00751 764 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 RBM25P49756 843 aaKnown RBP16.15■□□□□ 0.18
CCM2-217ENST00000492883 AK2P54819 239 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 STK3Q13188 491 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 PRAMEF19Q5SWL8 479 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 MAP3K21Q5TCX8 1036 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 SLC30A10Q6XR72 485 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 DEFB118Q96PH6 123 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
CCM2-217ENST00000492883 MAF1Q9H063 256 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCM2-217ENST00000492883 ADD3Q9UEY8 706 aaKnown RBP16.15■□□□□ 0.18
CCM2-217ENST00000492883 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 PARP14Q460N5 1801 aa16.15■□□□□ 0.18
CCM2-217ENST00000492883 POTEFA5A3E0 1075 aa16.14■□□□□ 0.17
CCM2-217ENST00000492883 ASB14A6NK59 587 aa16.14■□□□□ 0.17
CCM2-217ENST00000492883 IGHA2P01877 340 aa16.14■□□□□ 0.17
CCM2-217ENST00000492883 GJB1P08034 283 aa16.14■□□□□ 0.17
CCM2-217ENST00000492883 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
CCM2-217ENST00000492883 AKAP17AQ02040 695 aaKnown RBP16.14■□□□□ 0.17
CCM2-217ENST00000492883 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
CCM2-217ENST00000492883 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
CCM2-217ENST00000492883 NCOA5Q9HCD5 579 aaKnown RBP16.14■□□□□ 0.17
CCM2-217ENST00000492883 MGAMO43451 1857 aa16.14■□□□□ 0.17
CCM2-217ENST00000492883 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
CCM2-217ENST00000492883 CPLX1O14810 134 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms