RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 SPRED2Q7Z698 418 aa14.46□□□□□ -0.09
GPNMB-214ENST00000492858 HERC6Q8IVU3 1022 aa14.46□□□□□ -0.09
GPNMB-214ENST00000492858 PHOSPHO2Q8TCD6 241 aa14.46□□□□□ -0.09
GPNMB-214ENST00000492858 EXOC6BQ9Y2D4 811 aa14.46□□□□□ -0.09
GPNMB-214ENST00000492858 DDX49Q9Y6V7 483 aaKnown RBP14.46□□□□□ -0.09
GPNMB-214ENST00000492858 SOWAHBA6NEL2 793 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 LPXNO60711 386 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 SUPT20HL2P0C7V6 817 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 ERC1Q8IUD2 1116 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 FAM133AQ8N9E0 248 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 SNX27Q96L92 541 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 IL1RAPL2Q9NP60 686 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 PDGFCQ9NRA1 345 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 NYAP2Q9P242 653 aa14.45□□□□□ -0.1
GPNMB-214ENST00000492858 TNKSO95271 1327 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 ASB14A6NK59 587 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 ADD2P35612 726 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 OAZ1P54368 228 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 TMEM63BQ5T3F8 832 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 CTR9Q6PD62 1173 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 GJD3Q8N144 294 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 GDPD5Q8WTR4 605 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 FTOQ9C0B1 505 aaKnown RBP eCLIP14.44□□□□□ -0.1
GPNMB-214ENST00000492858 ACAD9Q9H845 621 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 FEM1BQ9UK73 627 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 COG6Q9Y2V7 657 aa14.44□□□□□ -0.1
GPNMB-214ENST00000492858 BAZ2AQ9UIF9 1905 aaKnown RBP14.43□□□□□ -0.1
GPNMB-214ENST00000492858 SSTR3P32745 418 aaPredicted RBP14.43□□□□□ -0.1
GPNMB-214ENST00000492858 RFC2P35250 354 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 NHLH1Q02575 133 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 EEPD1Q7L9B9 569 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 FBXO16Q8IX29 292 aaPredicted RBP14.43□□□□□ -0.1
GPNMB-214ENST00000492858 FAM178BQ8IXR5 827 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 STK11IPQ8N1F8 1099 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.43□□□□□ -0.1
GPNMB-214ENST00000492858 UBE2ZQ9H832 354 aaPredicted RBP14.43□□□□□ -0.1
GPNMB-214ENST00000492858 A1CFQ9NQ94 594 aaKnown RBP14.43□□□□□ -0.1
GPNMB-214ENST00000492858 CLIP2Q9UDT6 1046 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 Q9Y3F1 56 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 SLC4A4Q9Y6R1 1079 aa14.43□□□□□ -0.1
GPNMB-214ENST00000492858 ZBED9Q6R2W3 1325 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 LCHNA4D1U4 455 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 CHGBP05060 677 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 RASA1P20936 1047 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 CSPP1Q1MSJ5 1256 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 FAM47CQ5HY64 1035 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 TAPT1Q6NXT6 567 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 BCL11AQ9H165 835 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 MKNK2Q9HBH9 465 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 RNF146Q9NTX7 359 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 BRWD1Q9NSI6 2320 aa14.42□□□□□ -0.1
GPNMB-214ENST00000492858 USP34Q70CQ2 3546 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 ZNF316A6NFI3 1004 aaPredicted RBP14.41□□□□□ -0.1
GPNMB-214ENST00000492858 IQCF3P0C7M6 154 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 ALADP13716 330 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 KCNA5P22460 613 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 ZKSCAN2Q63HK3 967 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 CEP85Q6P2H3 762 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 KIAA1211Q6ZU35 1233 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 RETREG2Q8NC44 543 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.1
GPNMB-214ENST00000492858 POLR3EQ9NVU0 708 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 LMCD1Q9NZU5 365 aa14.41□□□□□ -0.1
GPNMB-214ENST00000492858 ARPP21Q9UBL0 812 aaPredicted RBP14.41□□□□□ -0.1
GPNMB-214ENST00000492858 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
GPNMB-214ENST00000492858 TRIOO75962 3097 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 COL4A4P53420 1690 aaPredicted RBP14.4□□□□□ -0.1
GPNMB-214ENST00000492858 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 MYL3P08590 195 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 KCNJ6P48051 423 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 PURAQ00577 322 aaKnown RBP14.4□□□□□ -0.1
GPNMB-214ENST00000492858 LEXMQ3ZCV2 418 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 LRRC47Q8N1G4 583 aaKnown RBP14.4□□□□□ -0.1
GPNMB-214ENST00000492858 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.4□□□□□ -0.1
GPNMB-214ENST00000492858 RHPN1Q8TCX5 695 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 PPP1R13LQ8WUF5 828 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 FBXL18Q96ME1 805 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 MTUS1Q9ULD2 1270 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 SCN5AQ14524 2016 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 ZNF536O15090 1300 aa14.4□□□□□ -0.1
GPNMB-214ENST00000492858 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 IGKV6D-41A0A0C4DH26 115 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 IFIT2P09913 472 aaKnown RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 FDX1P10109 184 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 ALAS1P13196 640 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 IL9P15248 144 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 HSP90AB4PQ58FF6 505 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 TMCO2Q7Z6W1 182 aaPredicted RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 FTSJ3Q8IY81 847 aaKnown RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 CLASRPQ8N2M8 674 aaKnown RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 CEP95Q96GE4 821 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 TRERF1Q96PN7 1200 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 MTG1Q9BT17 334 aaPredicted RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 ZBED2Q9BTP6 218 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms