RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 SKIV2LQ15477 1246 aaKnown RBP16.36■□□□□ 0.21
GPNMB-213ENST00000492512 SIRT2Q8IXJ6 389 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 LRRC47Q8N1G4 583 aaKnown RBP16.36■□□□□ 0.21
GPNMB-213ENST00000492512 MKL1Q969V6 931 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 CEP95Q96GE4 821 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 WNT8AQ9H1J5 351 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 SYNPO2Q9UMS6 1093 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 GNEQ9Y223 722 aaKnown RBP16.36■□□□□ 0.21
GPNMB-213ENST00000492512 GRIN2DO15399 1336 aa16.36■□□□□ 0.21
GPNMB-213ENST00000492512 SOWAHBA6NEL2 793 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 PRDM1O75626 825 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 TTLL1O95922 423 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 MS4A1P11836 297 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 BMP3P12645 472 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 MYOGP15173 224 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 ATP2A2P16615 1042 aaKnown RBP16.35■□□□□ 0.21
GPNMB-213ENST00000492512 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 A1CFQ9NQ94 594 aaKnown RBP16.35■□□□□ 0.21
GPNMB-213ENST00000492512 RNF146Q9NTX7 359 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
GPNMB-213ENST00000492512 LRRC37A2A6NM11 1700 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 TMEM232C9JQI7 657 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 SMPD1P17405 629 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 TDO2P48775 406 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 KCNQ1P51787 676 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 STAT2P52630 851 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 PSMC6P62333 389 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
GPNMB-213ENST00000492512 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 SCLYQ96I15 445 aa16.34■□□□□ 0.21
GPNMB-213ENST00000492512 ERC2O15083 957 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 GTPBP6O43824 516 aaPredicted RBP16.33■□□□□ 0.2
GPNMB-213ENST00000492512 PTGS1P23219 599 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.2
GPNMB-213ENST00000492512 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 IQSEC1Q6DN90 963 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 EEPD1Q7L9B9 569 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 CHURC1Q8WUH1 139 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 SCN5AQ14524 2016 aa16.33■□□□□ 0.2
GPNMB-213ENST00000492512 APPP05067 770 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 PFKMP08237 780 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 ALAS1P13196 640 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 FBXO16Q8IX29 292 aaPredicted RBP16.32■□□□□ 0.2
GPNMB-213ENST00000492512 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
GPNMB-213ENST00000492512 PDGFCQ9NRA1 345 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 Q9Y3F1 56 aa16.32■□□□□ 0.2
GPNMB-213ENST00000492512 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
GPNMB-213ENST00000492512 ZNF536O15090 1300 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 RFXAPO00287 272 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 GPAA1O43292 621 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 CA3P07451 260 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 SUPT20HL2P0C7V6 817 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 GNAT2P19087 354 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 TAPT1Q6NXT6 567 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 KBTBD3Q8NAB2 608 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 APPBP2Q92624 585 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 CHMP4CQ96CF2 233 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 VWCEQ96DN2 955 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
GPNMB-213ENST00000492512 MTCH2Q9Y6C9 303 aa16.31■□□□□ 0.2
GPNMB-213ENST00000492512 CYP2C9P11712 490 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 ACTN1P12814 892 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 POU3F3P20264 500 aaPredicted RBP16.3■□□□□ 0.2
GPNMB-213ENST00000492512 SLC1A4P43007 532 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 TMEM63BQ5T3F8 832 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 NEDD1Q8NHV4 660 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 CERS4Q9HA82 394 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
GPNMB-213ENST00000492512 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 COG5Q9UP83 839 aa16.3■□□□□ 0.2
GPNMB-213ENST00000492512 LCTP09848 1927 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 PLIN4Q96Q06 1357 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 TNKSO95271 1327 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 RNF113AO15541 343 aaKnown RBP16.29■□□□□ 0.2
GPNMB-213ENST00000492512 MCCP23508 829 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 PDE4BQ07343 736 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 NSMFQ6X4W1 530 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 CYP39A1Q9NYL5 469 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 HCN4Q9Y3Q4 1203 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 BRWD1Q9NSI6 2320 aa16.29■□□□□ 0.2
GPNMB-213ENST00000492512 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms