RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 USP17L24Q0WX57 530 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 CCDC174Q6PII3 467 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 GADL1Q6ZQY3 521 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 REPS2Q8NFH8 660 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-222ENST00000492423 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 TFIP11Q9UBB9 837 aaKnown RBP17.08■□□□□ 0.32
COPS7B-222ENST00000492423 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 PCDHA1Q9Y5I3 950 aa17.08■□□□□ 0.32
COPS7B-222ENST00000492423 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
COPS7B-222ENST00000492423 OPLAHO14841 1288 aa17.07■□□□□ 0.32
COPS7B-222ENST00000492423 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
COPS7B-222ENST00000492423 GNA11P29992 359 aa17.07■□□□□ 0.32
COPS7B-222ENST00000492423 CLK2P49760 499 aaKnown RBP17.07■□□□□ 0.32
COPS7B-222ENST00000492423 TOB1P50616 345 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-222ENST00000492423 USH1GQ495M9 461 aa17.07■□□□□ 0.32
COPS7B-222ENST00000492423 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
COPS7B-222ENST00000492423 SPDYE16A6NNV3 312 aaPredicted RBP17.06■□□□□ 0.32
COPS7B-222ENST00000492423 ICAM1P05362 532 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 FDX1P10109 184 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
COPS7B-222ENST00000492423 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
COPS7B-222ENST00000492423 PIK3AP1Q6ZUJ8 805 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 LEO1Q8WVC0 666 aaPredicted RBP17.06■□□□□ 0.32
COPS7B-222ENST00000492423 POLR3EQ9NVU0 708 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 TMEM260Q9NX78 707 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 RTEL1Q9NZ71 1219 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
COPS7B-222ENST00000492423 ABCB11O95342 1321 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 GOLGA6L22H0YM25 854 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 VWA5AO00534 786 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 WNT7AO00755 349 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 FSTL1Q12841 308 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 NBR1Q14596 966 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 COG2Q14746 738 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 UBE2SQ16763 222 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 SPRYD7Q5W111 196 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 REXO1Q8N1G1 1221 aaKnown RBP17.05■□□□□ 0.32
COPS7B-222ENST00000492423 BICD2Q8TD16 824 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 CUL5Q93034 780 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
COPS7B-222ENST00000492423 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
COPS7B-222ENST00000492423 ELP1O95163 1332 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 ZBED4O75132 1171 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 CLCN6P51797 869 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 HUNKP57058 714 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 TRAF1Q13077 416 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 PTPAQ15257 358 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 RILPL1Q5EBL4 403 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 SCAND2PQ9GZW5 306 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-222ENST00000492423 BIN2Q9UBW5 565 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-222ENST00000492423 RCOR1Q9UKL0 485 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 CCPG1Q9ULG6 757 aa17.04■□□□□ 0.32
COPS7B-222ENST00000492423 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 MEIS2O14770 477 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 YEATS4O95619 227 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 MRPL12P52815 198 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 JAKMIP3Q5VZ66 844 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 FASTKD5Q7L8L6 764 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 SPATA32Q96LK8 384 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 PSTPIP2Q9H939 334 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 ZNF214Q9UL59 606 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 MRPL11Q9Y3B7 192 aaKnown RBP17.03■□□□□ 0.32
COPS7B-222ENST00000492423 PCDHB6Q9Y5E3 794 aa17.03■□□□□ 0.32
COPS7B-222ENST00000492423 ATP2A1O14983 1001 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 GTF2A2P52657 109 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 OAZ1P54368 228 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.32
COPS7B-222ENST00000492423 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
COPS7B-222ENST00000492423 SF3A1Q15459 793 aaKnown RBP17.02■□□□□ 0.32
COPS7B-222ENST00000492423 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 INF2Q27J81 1249 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 TTC38Q5R3I4 469 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 LBX2Q6XYB7 198 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 CLEC4DQ8WXI8 215 aa17.02■□□□□ 0.32
COPS7B-222ENST00000492423 PGBD1Q96JS3 809 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms