RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ZC3H14Q6PJT7 736 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 SPOCD1Q6ZMY3 1216 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 HOMEZQ8IX15 550 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 MZB1Q8WU39 189 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 SMARCC1Q92922 1105 aaPredicted RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 ANAPC16Q96DE5 110 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 DDX11Q96FC9 970 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 CHAMP1Q96JM3 812 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 GP6Q9HCN6 339 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 PARD6AQ9NPB6 346 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 CD320Q9NPF0 282 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 USP40Q9NVE5 1235 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 INPP5FQ9Y2H2 1132 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 R3HCC1Q9Y3T6 440 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNF451Q9Y4E5 1061 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 SLC12A7Q9Y666 1083 aa2.8□□□□□ -1.96
SNRNP40-207ENST00000491106 ATAD2BQ9ULI0 1458 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 DHX57Q6P158 1386 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 ZC3H12DA2A288 527 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 TNFRSF10CO14798 259 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 ANP32CO43423 234 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 KRT1P04264 644 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 MED14OSP0DP75 135 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 L1CAMP32004 1257 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 RANGAP1P46060 587 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 EPHB3P54753 998 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 PRR5P85299 388 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNF200P98182 395 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 AMPD2Q01433 879 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 DDX10Q13206 875 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 SSPNQ14714 243 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 ZYXQ15942 572 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 KIAA1211LQ6NV74 962 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 AMIGO3Q86WK7 504 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 LDHDQ86WU2 507 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 LSRQ86X29 649 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 CPNE8Q86YQ8 564 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 SHISA4Q96DD7 197 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 SPATA32Q96LK8 384 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 JMJD8Q96S16 334 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 APBA2Q99767 749 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 SRRTQ9BXP5 876 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 CNTD2Q9H8S5 307 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 SP110Q9HB58 689 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 RXFP1Q9HBX9 757 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 METTL5Q9NRN9 209 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 GINM1Q9NU53 330 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 ERVK13-1Q9NX77 482 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 KLHL14Q9P2G3 628 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 SUSD2Q9UGT4 822 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 MBD1Q9UIS9 605 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 DDX41Q9UJV9 622 aaKnown RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNRF3Q9ULT6 936 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 AKT3Q9Y243 479 aa2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-207ENST00000491106 MAP3K1Q13233 1512 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 NCAPD3P42695 1498 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 KIF27Q86VH2 1401 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 SETD5Q9C0A6 1442 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 RRBP1Q9P2E9 1410 aaKnown RBP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 NPHP3-ACAD11A0A0J9YXS1 232 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 C2orf71A6NGG8 1288 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 STXBP3O00186 592 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNF205O95201 554 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 SSBP05455 408 aaKnown RBP eCLIP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 ACRP10323 421 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 PAMP19021 973 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 HOXA5P20719 270 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 CTSKP43235 329 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 KCNJ6P48051 423 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 NASPP49321 788 aaPredicted RBP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 RACK1P63244 317 aaKnown RBP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 FANCCQ00597 558 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 GNL2Q13823 731 aaKnown RBP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 SV2CQ496J9 727 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 ANKRD39Q53RE8 183 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 PAQR3Q6TCH7 311 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 CYP2R1Q6VVX0 501 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 RPTNQ6XPR3 784 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 NT5DC4Q86YG4 428 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 LZTR1Q8N653 840 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 FEZF2Q8TBJ5 459 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 ALG3Q92685 438 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 GPRASP2Q96D09 838 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 MRRFQ96E11 262 aaKnown RBP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 PTCHD1Q96NR3 888 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 FCRL3Q96P31 734 aaPredicted RBP2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 YIPF4Q9BSR8 244 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 ANP32EQ9BTT0 268 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 G6PC3Q9BUM1 346 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 SLC12A9Q9BXP2 914 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 CCSER2Q9H7U1 834 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 PDLIM7Q9NR12 457 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 KCNQ5Q9NR82 932 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 NUDT5Q9UKK9 219 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 RWDD3Q9Y3V2 267 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 FHOD1Q9Y613 1164 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 BICRAQ9NZM4 1560 aa2.78□□□□□ -1.96
SNRNP40-207ENST00000491106 ERICH3Q5RHP9 1530 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms