RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 CD99L2Q8TCZ2 262 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 AMNQ9BXJ7 453 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 STXBP3O00186 592 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 NFIBO00712 420 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 DEXIO95424 95 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 SCG2P13521 617 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 CCNA1P78396 465 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 SP3Q02447 781 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 ZNF296Q8WUU4 475 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 CLEC4DQ8WXI8 215 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 LLPHQ9BRT6 129 aaKnown RBP12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 GJB4Q9NTQ9 266 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
CACNA1C-227ENST00000491104 ABCB11O95342 1321 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 ADAMTS3O15072 1205 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 FKTNO75072 461 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 SLC25A27O95847 323 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 HSPA8P11142 646 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 NAPAP54920 295 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 LACTBP83111 547 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 NSMFQ6X4W1 530 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 GPR142Q7Z601 462 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 CCAR1Q8IX12 1150 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 CWC22Q9HCG8 908 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 PLXNA1Q9UIW2 1896 aa12.42□□□□□ -0.42
CACNA1C-227ENST00000491104 PCNTO95613 3336 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 TNPO2O14787 897 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 OPLAHO14841 1288 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 GJB2P29033 226 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 PSMC4P43686 418 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 TKFCQ3LXA3 575 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 SLC30A10Q6XR72 485 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 TRIM47Q96LD4 638 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 MMP19Q99542 508 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 MRPL11Q9Y3B7 192 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 RBM19Q9Y4C8 960 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
CACNA1C-227ENST00000491104 PGK2P07205 417 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 MAPK4P31152 587 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 COPB2P35606 906 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 LBX1P52954 281 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 FCGRTP55899 365 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 UBE2SQ16763 222 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 FAM184AQ8NB25 1140 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 CHST13Q8NET6 341 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 MROH8Q9H579 483 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 BARHL2Q9NY43 387 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 KCNJ14Q9UNX9 436 aa12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-227ENST00000491104 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 CFBP00751 764 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 PTPREP23469 700 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 HOXA13P31271 388 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 ANP32AP39687 249 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 BECN1Q14457 450 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 KIF22Q14807 665 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 ANKRD35Q8N283 1001 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 RASGRP4Q8TDF6 673 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 ERO1AQ96HE7 468 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 PNMA2Q9UL42 364 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
CACNA1C-227ENST00000491104 MCM3APO60318 1980 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 hCG_1984214I3L0E3 225 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 FCER1AP12319 257 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 CALML3P27482 149 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 ADORA2AP29274 412 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 ADCY7P51828 1080 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 NLRP5P59047 1200 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 RPS6P62753 249 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 BAATQ14032 418 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 GRB14Q14449 540 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 KCTD2Q14681 263 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 MORN1Q5T089 497 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CACNA1C-227ENST00000491104 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms