RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SLC16A2P36021 539 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 FPGSQ05932 587 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 CCSAPQ6IQ19 270 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-216ENST00000490796 CHD1LQ86WJ1 897 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 SMC5Q8IY18 1101 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
SREBF1-216ENST00000490796 GPCPD1Q9NPB8 672 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 TCP11L1Q9NUJ3 509 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 CYP39A1Q9NYL5 469 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 A0A0U1RQG5 324 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-216ENST00000490796 NOVP48745 357 aa23.21■■□□□ 1.31
SREBF1-216ENST00000490796 FAAP100Q0VG06 881 aa23.21■■□□□ 1.31
SREBF1-216ENST00000490796 MUM1L1Q5H9M0 696 aa23.21■■□□□ 1.31
SREBF1-216ENST00000490796 AKNAD1Q5T1N1 836 aa23.21■■□□□ 1.31
SREBF1-216ENST00000490796 TTBK2Q6IQ55 1244 aa23.21■■□□□ 1.31
SREBF1-216ENST00000490796 DIAPH3Q9NSV4 1193 aa23.21■■□□□ 1.31
SREBF1-216ENST00000490796 FRMPD2Q68DX3 1309 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-216ENST00000490796 TLR3O15455 904 aaKnown RBP23.2■■□□□ 1.3
SREBF1-216ENST00000490796 ADCY6O43306 1168 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 ZEB2O60315 1214 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 SDSP20132 328 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 ITGB8P26012 769 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 IRX5P78411 483 aaPredicted RBP23.2■■□□□ 1.3
SREBF1-216ENST00000490796 TTC14Q96N46 770 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 KATNBL1Q9H079 304 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 RANBP17Q9H2T7 1088 aaKnown RBP23.2■■□□□ 1.3
SREBF1-216ENST00000490796 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
SREBF1-216ENST00000490796 PNMA2Q9UL42 364 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 COL6A3P12111 3177 aa23.2■■□□□ 1.3
SREBF1-216ENST00000490796 ARVCFO00192 962 aa23.19■■□□□ 1.3
SREBF1-216ENST00000490796 SMAD3P84022 425 aaKnown RBP23.19■■□□□ 1.3
SREBF1-216ENST00000490796 BTNL9Q6UXG8 535 aa23.19■■□□□ 1.3
SREBF1-216ENST00000490796 EEPD1Q7L9B9 569 aa23.19■■□□□ 1.3
SREBF1-216ENST00000490796 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
SREBF1-216ENST00000490796 ESR2Q92731 530 aa23.19■■□□□ 1.3
SREBF1-216ENST00000490796 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-216ENST00000490796 PTPDC1A2A3K4 754 aa23.18■■□□□ 1.3
SREBF1-216ENST00000490796 ZNF213O14771 459 aa23.18■■□□□ 1.3
SREBF1-216ENST00000490796 DYNC1LI2O43237 492 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-216ENST00000490796 TIMP1P01033 207 aa23.18■■□□□ 1.3
SREBF1-216ENST00000490796 BEX3Q00994 111 aa23.18■■□□□ 1.3
SREBF1-216ENST00000490796 IQSEC1Q6DN90 963 aa23.18■■□□□ 1.3
SREBF1-216ENST00000490796 HIP1O00291 1037 aa23.17■■□□□ 1.3
SREBF1-216ENST00000490796 DLL1O00548 723 aa23.17■■□□□ 1.3
SREBF1-216ENST00000490796 CABYRO75952 493 aa23.17■■□□□ 1.3
SREBF1-216ENST00000490796 NUCB1Q02818 461 aa23.17■■□□□ 1.3
SREBF1-216ENST00000490796 BAATQ14032 418 aaPredicted RBP23.17■■□□□ 1.3
SREBF1-216ENST00000490796 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
SREBF1-216ENST00000490796 PLEKHM2Q8IWE5 1019 aa23.17■■□□□ 1.3
SREBF1-216ENST00000490796 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
SREBF1-216ENST00000490796 VTA1Q9NP79 307 aa23.17■■□□□ 1.3
SREBF1-216ENST00000490796 PDHBP11177 359 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 CDK7P50613 346 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 FSCN1Q16658 493 aaKnown RBP23.16■■□□□ 1.3
SREBF1-216ENST00000490796 CCDC178Q5BJE1 867 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 CXCL17Q6UXB2 119 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 KIAA1211Q6ZU35 1233 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 GUCD1Q96NT3 240 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 MPHOSPH6Q99547 160 aaKnown RBP23.16■■□□□ 1.3
SREBF1-216ENST00000490796 OSBPL3Q9H4L5 887 aa23.16■■□□□ 1.3
SREBF1-216ENST00000490796 IGHDP01880 384 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 SMPD1P17405 629 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 EPHB4P54760 987 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 ZNF543Q08ER8 600 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 PPIGQ13427 754 aaKnown RBP eCLIP23.15■■□□□ 1.32e-9■□□□□ 10
SREBF1-216ENST00000490796 IQCA1Q86XH1 822 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 TMEM199Q8N511 208 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 EXOC6Q8TAG9 804 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 PDGFCQ9NRA1 345 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 TBX21Q9UL17 535 aa23.15■■□□□ 1.3
SREBF1-216ENST00000490796 GNEQ9Y223 722 aaKnown RBP23.15■■□□□ 1.3
SREBF1-216ENST00000490796 DDX49Q9Y6V7 483 aaKnown RBP23.15■■□□□ 1.3
SREBF1-216ENST00000490796 LAMA2P24043 3122 aaKnown RBP23.15■■□□□ 1.3
SREBF1-216ENST00000490796 NFIBO00712 420 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 CALML3P27482 149 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 NT5C2P49902 561 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 NKX3-2P78367 333 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 MFSD5Q6N075 450 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 ZKSCAN3Q9BRR0 538 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 SEMA6BQ9H3T3 888 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 Q9Y3F1 56 aa23.14■■□□□ 1.29
SREBF1-216ENST00000490796 ASTN1O14525 1302 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 LOC102724159A0A0B4J2E5 919 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 CTAGE5O15320 804 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 ALDH5A1P51649 535 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-216ENST00000490796 PWP2Q15269 919 aaKnown RBP23.13■■□□□ 1.29
SREBF1-216ENST00000490796 GPATCH4Q5T3I0 446 aaKnown RBP23.13■■□□□ 1.29
SREBF1-216ENST00000490796 TAPT1Q6NXT6 567 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 RNF207Q6ZRF8 634 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 PURBQ96QR8 312 aaKnown RBP23.13■■□□□ 1.29
SREBF1-216ENST00000490796 PPP1R12CQ9BZL4 782 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 CUL9Q8IWT3 2517 aa23.13■■□□□ 1.29
SREBF1-216ENST00000490796 NEDD4P46934 1319 aa23.12■■□□□ 1.29
SREBF1-216ENST00000490796 DGKHQ86XP1 1220 aa23.12■■□□□ 1.29
SREBF1-216ENST00000490796 FAM126BQ8IXS8 530 aa23.12■■□□□ 1.29
SREBF1-216ENST00000490796 CDX2Q99626 313 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-216ENST00000490796 SEZ6LQ9BYH1 1024 aa23.12■■□□□ 1.29
SREBF1-216ENST00000490796 KAT14Q9H8E8 782 aa23.12■■□□□ 1.29
SREBF1-216ENST00000490796 CTNNA3Q9UI47 895 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms