RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
UBP1-211ENST00000490112 RIPK3Q9Y572 518 aa12.71□□□□□ -0.37
UBP1-211ENST00000490112 VCANP13611 3396 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 PLIN4Q96Q06 1357 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 BMP3P12645 472 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
UBP1-211ENST00000490112 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 KCNA10Q16322 511 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 C20orf194Q5TEA3 1177 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 RNPC3Q96LT9 517 aaKnown RBP12.7□□□□□ -0.38
UBP1-211ENST00000490112 CDX2Q99626 313 aaPredicted RBP12.7□□□□□ -0.38
UBP1-211ENST00000490112 EPB41L4AQ9HCS5 686 aaPredicted RBP12.7□□□□□ -0.38
UBP1-211ENST00000490112 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
UBP1-211ENST00000490112 PRDM1O75626 825 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 TIMP1P01033 207 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
UBP1-211ENST00000490112 STAT2P52630 851 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 GJA9P57773 515 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 FAAP100Q0VG06 881 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 TKFCQ3LXA3 575 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 SLFN13Q68D06 897 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
UBP1-211ENST00000490112 GMCL1Q96IK5 515 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 SEZ6LQ9BYH1 1024 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 NAPBQ9H115 298 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
UBP1-211ENST00000490112 RAVER2Q9HCJ3 691 aaKnown RBP12.69□□□□□ -0.38
UBP1-211ENST00000490112 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
UBP1-211ENST00000490112 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.68□□□□□ -0.38
UBP1-211ENST00000490112 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.68□□□□□ -0.38
UBP1-211ENST00000490112 ASB14A6NK59 587 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 TMEM232C9JQI7 657 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 M0R2C6 588 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 PLA2G6O60733 806 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 TFAP4Q01664 338 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 CCDC144BQ3MJ40 725 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 GNASQ5JWF2 1037 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 MAFAQ8NHW3 353 aaPredicted RBP12.68□□□□□ -0.38
UBP1-211ENST00000490112 STAG1Q8WVM7 1258 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 VTI1AQ96AJ9 217 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
UBP1-211ENST00000490112 UPF3AQ9H1J1 476 aaKnown RBP12.68□□□□□ -0.38
UBP1-211ENST00000490112 A0A0U1RQG5 324 aaPredicted RBP12.67□□□□□ -0.38
UBP1-211ENST00000490112 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
UBP1-211ENST00000490112 ASGR1P07306 291 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 ITGB8P26012 769 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 SLC1A4P43007 532 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 CDK7P50613 346 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 NKX3-2P78367 333 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 PPARAQ07869 468 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 IKQ13123 557 aaPredicted RBP12.67□□□□□ -0.38
UBP1-211ENST00000490112 PPIGQ13427 754 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBP1-211ENST00000490112 TSHZ3Q63HK5 1081 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 LRRC47Q8N1G4 583 aaKnown RBP12.67□□□□□ -0.38
UBP1-211ENST00000490112 LENG1Q96BZ8 264 aaPredicted RBP12.67□□□□□ -0.38
UBP1-211ENST00000490112 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
UBP1-211ENST00000490112 ISY1Q9ULR0 285 aaKnown RBP12.67□□□□□ -0.38
UBP1-211ENST00000490112 ARVCFO00192 962 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 STK25O00506 426 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 CABYRO75952 493 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 FOSL2P15408 326 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 TICAM2Q86XR7 235 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 TMEM199Q8N511 208 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 FAM133AQ8N9E0 248 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
UBP1-211ENST00000490112 TTYH1Q9H313 450 aaPredicted RBP12.66□□□□□ -0.38
UBP1-211ENST00000490112 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
UBP1-211ENST00000490112 TSPY2A6NKD2 308 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 ZEB2O60315 1214 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 MX1P20591 662 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 EPHB4P54760 987 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 TNFAIP2Q03169 654 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 RCSD1Q6JBY9 416 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 PSRC1Q6PGN9 363 aaPredicted RBP12.65□□□□□ -0.38
UBP1-211ENST00000490112 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.38
UBP1-211ENST00000490112 PI4K2BQ8TCG2 481 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
UBP1-211ENST00000490112 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
UBP1-211ENST00000490112 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 MCCP23508 829 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
UBP1-211ENST00000490112 FGD4Q96M96 766 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
UBP1-211ENST00000490112 KATNBL1Q9H079 304 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 AP5M1Q9H0R1 490 aa12.64□□□□□ -0.39
UBP1-211ENST00000490112 MTIF3Q9H2K0 278 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms