RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, human

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C2orf88-208	ENST00000490033	ELN	P15502	786 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	NAT1	P18440	290 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	CYP7A1	P22680	504 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	TRIM28	Q13263	835 aa	Known RBP	4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	BIRC2	Q13490	618 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	SART3	Q15020	963 aa	Known RBP	4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	CDPF1	Q6NVV7	123 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	MTDH	Q86UE4	582 aa	Known RBP	4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	NXPE1	Q8N323	547 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	TTC8	Q8TAM2	541 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	FRS2	Q8WU20	508 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	COPS5	Q92905	334 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	IRF7	Q92985	503 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	MCMBP	Q9BTE3	642 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	PLVAP	Q9BX97	442 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	CRTAC1	Q9NQ79	661 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	GPRC5C	Q9NQ84	441 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	MINPP1	Q9UNW1	487 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	APOBEC2	Q9Y235	224 aa	Known RBP	4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	SPEF1	Q9Y4P9	236 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	ST14	Q9Y5Y6	855 aa		4.27	□□□□□ -1.73
C2orf88-208	ENST00000490033	ZNF891	A8MT65	544 aa	Predicted RBP	4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	STXBP3	O00186	592 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	ARVCF	O00192	962 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	CBX4	O00257	560 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	MEIS1	O00470	390 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	GAS2	O43903	313 aa	Known RBP	4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	FBXO21	O94952	628 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	ALX3	O95076	343 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	PRAMEF1	O95521	474 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	KRT18	P05783	430 aa	Known RBP	4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	GSN	P06396	782 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	ADCYAP1R1	P41586	468 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	IL2	P60568	153 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	GPR85	P60893	370 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	POU4F1	Q01851	419 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	UBE4A	Q14139	1066 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	SHISA2	Q6UWI4	295 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	LINC00114	Q6XXX2	140 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	PPIL6	Q8IXY8	311 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	SMC5	Q8IY18	1101 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	IFNL3	Q8IZI9	196 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	IGSF22	Q8N9C0	903 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	DTWD2	Q8NBA8	298 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	SMC1B	Q8NDV3	1235 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	NPLOC4	Q8TAT6	608 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	WHAMM	Q8TF30	809 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	FBLIM1	Q8WUP2	373 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	CAMKK2	Q96RR4	588 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	RPS6KC1	Q96S38	1066 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	ZFYVE21	Q9BQ24	234 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	PHF20	Q9BVI0	1012 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	CHST7	Q9NS84	486 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	ZNF180	Q9UJW8	692 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	TPX2	Q9ULW0	747 aa	Known RBP	4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	NOB1	Q9ULX3	412 aa	Known RBP	4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	RNF112	Q9ULX5	631 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	NPFFR2	Q9Y5X5	522 aa		4.26	□□□□□ -1.73
C2orf88-208	ENST00000490033	C2orf71	A6NGG8	1288 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	ARNTL	O00327	626 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	TRAF5	O00463	557 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	AURKA	O14965	403 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	PLIN1	O60240	522 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	PRKD3	O94806	890 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	ABLIM3	O94929	683 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	FKBP9	O95302	570 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	CD3E	P07766	207 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	CTSK	P43235	329 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	DSG1	Q02413	1049 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	NMI	Q13287	307 aa	Predicted RBP	4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	CDK5R2	Q13319	367 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	FAM102B	Q5T8I3	360 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	CWF19L1	Q69YN2	538 aa	Known RBP	4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	NXN	Q6DKJ4	435 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	IQSEC1	Q6DN90	963 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	SEZ6L2	Q6UXD5	910 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	FKBP9P1	Q75LS8	142 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	TCEAL8	Q8IYN2	117 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	TOP6BL	Q8N6T0	577 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	NEDD1	Q8NHV4	660 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	EZH1	Q92800	747 aa	Predicted RBP	4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033		Q96M66	194 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	SPOCK3	Q9BQ16	436 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	MENT	Q9BUN1	341 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	YIPF2	Q9BWQ6	316 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	CEP41	Q9BYV8	373 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	AKTIP	Q9H8T0	292 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	ARNT2	Q9HBZ2	717 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	GPR27	Q9NS67	375 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	KCNH3	Q9ULD8	1083 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	COQ6	Q9Y2Z9	468 aa		4.25	□□□□□ -1.73
C2orf88-208	ENST00000490033	WDR64	B1ANS9	1081 aa		4.24	□□□□□ -1.73
C2orf88-208	ENST00000490033	GNB5	O14775	395 aa		4.24	□□□□□ -1.73
C2orf88-208	ENST00000490033	MEFV	O15553	781 aa	Predicted RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms