RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 TIMP1P01033 207 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 RAG1P15918 1043 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 NUCB1Q02818 461 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 TNFAIP2Q03169 654 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
CCT3-213ENST00000489870 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 SLC43A3Q8NBI5 491 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 SLC17A8Q8NDX2 589 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 ESR2Q92731 530 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 FERMT2Q96AC1 680 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 KATNBL1Q9H079 304 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 TMEM39AQ9NV64 488 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 CCDC171Q6TFL3 1326 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 MCM3APO60318 1980 aa11.23□□□□□ -0.61
CCT3-213ENST00000489870 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 TRIM43BA6NCK2 446 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 ZNF213O14771 459 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 NKRFO15226 690 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCT3-213ENST00000489870 KPNA6O60684 536 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 ASGR1P07306 291 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 SDSP20132 328 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 CTDSPL2Q05D32 466 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 FAAP100Q0VG06 881 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 TRAF1Q13077 416 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 BRDTQ58F21 947 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 ANO1Q5XXA6 986 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 BADQ92934 168 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 TRIM43Q96BQ3 446 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 FGD4Q96M96 766 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 AGBL1Q96MI9 1066 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 AP5M1Q9H0R1 490 aa11.22□□□□□ -0.61
CCT3-213ENST00000489870 MAP3K20Q9NYL2 800 aaKnown RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
CCT3-213ENST00000489870 LTBP2Q14767 1821 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
CCT3-213ENST00000489870 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 ALAS1P13196 640 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 FPGSQ05932 587 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 PPIGQ13427 754 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCT3-213ENST00000489870 SHHQ15465 462 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 ZNF697Q5TEC3 545 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 VPS53Q5VIR6 699 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 SYDE2Q5VT97 1194 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 KCTD1Q719H9 257 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 PLEKHM2Q8IWE5 1019 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 TMEM199Q8N511 208 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 CNNM2Q9H8M5 875 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 TBX21Q9UL17 535 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 CCPG1Q9ULG6 757 aa11.21□□□□□ -0.61
CCT3-213ENST00000489870 MYO9BQ13459 2157 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 A0A0D9SFI3 127 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 SUPT20HL2P0C7V6 817 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 PDHBP11177 359 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 CNTN2Q02246 1040 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 ZNF543Q08ER8 600 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 DUSP28Q4G0W2 176 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 VTI1AQ96AJ9 217 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 KRT23Q9C075 422 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 LNPKQ9C0E8 428 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 PRDM5Q9NQX1 630 aaPredicted RBP11.2□□□□□ -0.62
CCT3-213ENST00000489870 TOMM22Q9NS69 142 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
CCT3-213ENST00000489870 CTAGE5O15320 804 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 PQBP1O60828 265 aaKnown RBP11.19□□□□□ -0.62
CCT3-213ENST00000489870 CD4P01730 458 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 CPT1AP50416 773 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
CCT3-213ENST00000489870 FSCN1Q16658 493 aaKnown RBP11.19□□□□□ -0.62
CCT3-213ENST00000489870 IMMTQ16891 758 aaKnown RBP11.19□□□□□ -0.62
CCT3-213ENST00000489870 CCDC96Q2M329 555 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 TAPT1Q6NXT6 567 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
CCT3-213ENST00000489870 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 IWS1Q96ST2 819 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 MTIF3Q9H2K0 278 aaKnown RBP11.19□□□□□ -0.62
CCT3-213ENST00000489870 SEMA6BQ9H3T3 888 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
CCT3-213ENST00000489870 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms