RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 THBDP07204 575 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 MBLAC2Q68D91 279 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 CYP2R1Q6VVX0 501 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 CRACR2BQ8N4Y2 399 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-206ENST00000489868 INTS4Q96HW7 963 aaKnown RBP8.17□□□□□ -1.1
CCDC39-206ENST00000489868 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-206ENST00000489868 EPN3Q9H201 632 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 CWC22Q9HCG8 908 aaKnown RBP8.17□□□□□ -1.1
CCDC39-206ENST00000489868 TAF6LQ9Y6J9 622 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 WTIPA6NIX2 430 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-206ENST00000489868 CCDC85CA6NKD9 419 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 PRKCAP17252 672 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 SDHBP21912 280 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 SEPHS1P49903 392 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 PPP2R2AP63151 447 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 MVKQ03426 396 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 SNX17Q15036 470 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 MLANAQ16655 118 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 PRSS53Q2L4Q9 553 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 GALNT18Q6P9A2 607 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 MPZL3Q6UWV2 235 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 SPATC1Q76KD6 591 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 FRS2Q8WU20 508 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 CYP26B1Q9NR63 512 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 CLEC1BQ9P126 229 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 ACSL6Q9UKU0 697 aa8.16□□□□□ -1.1
CCDC39-206ENST00000489868 FAM221BA6H8Z2 402 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 PLS3P13797 630 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 RASA3Q14644 834 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 HLA-DQA1Q5Y7H0 255 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 DENND5AQ6IQ26 1287 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 CPNE8Q86YQ8 564 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 ST13P5Q8NFI4 369 aaPredicted RBP8.15□□□□□ -1.1
CCDC39-206ENST00000489868 NPLOC4Q8TAT6 608 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 DIRC2Q96SL1 478 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 SIRPGQ9P1W8 387 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 FBLN5Q9UBX5 448 aa8.15□□□□□ -1.1
CCDC39-206ENST00000489868 PDPK1O15530 556 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 PPP1R11O60927 126 aaPredicted RBP8.14□□□□□ -1.11
CCDC39-206ENST00000489868 TBC1D8O95759 1140 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 GFRA1P56159 465 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 MESP2Q0VG99 397 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 LAPTM5Q13571 262 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 CCDC103Q8IW40 242 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 KREMEN2Q8NCW0 462 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 NUP43Q8NFH3 380 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 C1orf159Q96HA4 380 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 NSUN3Q9H649 340 aaKnown RBP8.14□□□□□ -1.11
CCDC39-206ENST00000489868 CRTAC1Q9NQ79 661 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 ARHGEF4Q9NR80 690 aa8.14□□□□□ -1.11
CCDC39-206ENST00000489868 TMEFF2Q9UIK5 374 aaPredicted RBP8.14□□□□□ -1.11
CCDC39-206ENST00000489868 U2SURPO15042 1029 aaKnown RBP8.13□□□□□ -1.11
CCDC39-206ENST00000489868 SCG5P05408 212 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 SNRPB2P08579 225 aaKnown RBP8.13□□□□□ -1.11
CCDC39-206ENST00000489868 PNLIPP16233 465 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 INF2Q27J81 1249 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 JAMLQ86YT9 394 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 KSR1Q8IVT5 923 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 TMEM145Q8NBT3 493 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 SNTG2Q9NY99 539 aa8.13□□□□□ -1.11
CCDC39-206ENST00000489868 NPHP3-ACAD11A0A0J9YXS1 232 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
CCDC39-206ENST00000489868 PAMP19021 973 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 HOXC12P31275 282 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 L1CAMP32004 1257 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 ECI1P42126 302 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 ADGRF1Q5T601 910 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 YOD1Q5VVQ6 348 aaPredicted RBP8.12□□□□□ -1.11
CCDC39-206ENST00000489868 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 FAM53CQ9NYF3 392 aa8.12□□□□□ -1.11
CCDC39-206ENST00000489868 C7orf72A4D263 438 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 ERVFRD-1P60508 538 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 CYP4F8P98187 520 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 ZNF648Q5T619 568 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-206ENST00000489868 IRF2BP1Q8IU81 584 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 POU5F2Q8N7G0 328 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 SGSM3Q96HU1 749 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 DRC1Q96MC2 740 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 DEPDC7Q96QD5 511 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 IER2Q9BTL4 223 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 TNFRSF12AQ9NP84 129 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 PFDN2Q9UHV9 154 aa8.11□□□□□ -1.11
CCDC39-206ENST00000489868 AGRPO00253 132 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 ADCY3O60266 1144 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 TACR1P25103 407 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 PDE6BP35913 854 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 SLC35F1Q5T1Q4 408 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 NLGN2Q8NFZ4 835 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 DPF3Q92784 378 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 MMP19Q99542 508 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 GULP1Q9UBP9 304 aa8.1□□□□□ -1.11
CCDC39-206ENST00000489868 MYOCOSA0A1B0GUC4 107 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 DLX3O60479 287 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 KCNJ6P48051 423 aa8.09□□□□□ -1.11
CCDC39-206ENST00000489868 MTERF2Q49AM1 385 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms