RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 C2orf69Q8N8R5 385 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 OTUD5Q96G74 571 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 SLC38A10Q9HBR0 1119 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 ADAMTS5Q9UNA0 930 aa16.21■□□□□ 0.19
VPS26A-205ENST00000489656 ABCB11O95342 1321 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 CELF2O95319 508 aaKnown RBP16.2■□□□□ 0.18
VPS26A-205ENST00000489656 ICAM1P05362 532 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
VPS26A-205ENST00000489656 SNAP25P60880 206 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 UBE2HP62256 183 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 KCNG4Q8TDN1 519 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 FTOQ9C0B1 505 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS26A-205ENST00000489656 PSTPIP2Q9H939 334 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 CLIC4Q9Y696 253 aa16.2■□□□□ 0.18
VPS26A-205ENST00000489656 ZNF536O15090 1300 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 BMP15O95972 392 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 MBD3O95983 291 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 COG2Q14746 738 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 PTPAQ15257 358 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
VPS26A-205ENST00000489656 PIK3AP1Q6ZUJ8 805 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
VPS26A-205ENST00000489656 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
VPS26A-205ENST00000489656 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
VPS26A-205ENST00000489656 LCTP09848 1927 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
VPS26A-205ENST00000489656 PIK3CDO00329 1044 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 VWA5AO00534 786 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 TRAK2O60296 914 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 ZBED4O75132 1171 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 PPP6R2O75170 966 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 GJA5P36382 358 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 OAZ1P54368 228 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 CEBPZQ03701 1054 aaKnown RBP16.18■□□□□ 0.18
VPS26A-205ENST00000489656 ORC2Q13416 577 aaPredicted RBP16.18■□□□□ 0.18
VPS26A-205ENST00000489656 MOGSQ13724 837 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 NBR1Q14596 966 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 STK38Q15208 465 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 NONOQ15233 471 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS26A-205ENST00000489656 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
VPS26A-205ENST00000489656 KLHL40Q2TBA0 621 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
VPS26A-205ENST00000489656 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 PASKQ96RG2 1323 aa16.18■□□□□ 0.18
VPS26A-205ENST00000489656 MEIS2O14770 477 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 OPLAHO14841 1288 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 SPTLC2O15270 562 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 GADD45BO75293 160 aaPredicted RBP16.17■□□□□ 0.18
VPS26A-205ENST00000489656 GHRHRQ02643 423 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 AP3B2Q13367 1082 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 SNAPC2Q13487 334 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 USH1GQ495M9 461 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 CST9Q5W186 159 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 ATG4CQ96DT6 458 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 GPBP1L1Q9HC44 474 aaPredicted RBP16.17■□□□□ 0.18
VPS26A-205ENST00000489656 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
VPS26A-205ENST00000489656 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
VPS26A-205ENST00000489656 FOSP01100 380 aaPredicted RBP16.16■□□□□ 0.18
VPS26A-205ENST00000489656 ZBTB48P10074 688 aaPredicted RBP16.16■□□□□ 0.18
VPS26A-205ENST00000489656 PABPC4Q13310 644 aaKnown RBP eCLIP16.16■□□□□ 0.18
VPS26A-205ENST00000489656 JAKMIP3Q5VZ66 844 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 GADL1Q6ZQY3 521 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 SAMD3Q8N6K7 520 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 PGBD1Q96JS3 809 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 MAF1Q9H063 256 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 BIN2Q9UBW5 565 aaPredicted RBP16.16■□□□□ 0.18
VPS26A-205ENST00000489656 CCPG1Q9ULG6 757 aa16.16■□□□□ 0.18
VPS26A-205ENST00000489656 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
VPS26A-205ENST00000489656 KIF3CO14782 793 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 UBE2SQ16763 222 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 INF2Q27J81 1249 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 NEK8Q86SG6 692 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 TMEM260Q9NX78 707 aa16.15■□□□□ 0.18
VPS26A-205ENST00000489656 MAP3K20Q9NYL2 800 aaKnown RBP16.15■□□□□ 0.18
VPS26A-205ENST00000489656 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
VPS26A-205ENST00000489656 A0A1W2PQ27 194 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 A0A1W2PQ64 194 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 A0A1W2PQD8 194 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 WNT7AO00755 349 aa16.14■□□□□ 0.17
VPS26A-205ENST00000489656 ME1P48163 572 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms