RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
CSF3R-213ENST00000489551 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
CSF3R-213ENST00000489551 TRIP12Q14669 1992 aaPredicted RBP11.97□□□□□ -0.49
CSF3R-213ENST00000489551 TET1Q8NFU7 2136 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 PTPRSQ13332 1948 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.49
CSF3R-213ENST00000489551 PLA2G6O60733 806 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 SMPD1P17405 629 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 PDE4BQ07343 736 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 CXCL17Q6UXB2 119 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 ZNF365Q70YC5 407 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 PCSK9Q8NBP7 692 aaKnown RBP11.96□□□□□ -0.49
CSF3R-213ENST00000489551 TRERF1Q96PN7 1200 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 PBX4Q9BYU1 374 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 NAPBQ9H115 298 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 CXXC1Q9P0U4 656 aaPredicted RBP11.96□□□□□ -0.49
CSF3R-213ENST00000489551 PRR12Q9ULL5 1215 aa11.96□□□□□ -0.49
CSF3R-213ENST00000489551 CTDP1Q9Y5B0 961 aaPredicted RBP11.96□□□□□ -0.49
CSF3R-213ENST00000489551 MYH6P13533 1939 aa11.96□□□□□ -0.5
CSF3R-213ENST00000489551 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 FGRP09769 529 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 FDX1P10109 184 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 ALAS1P13196 640 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 CYP2C18P33260 490 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 SLC1A4P43007 532 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 CCDC174Q6PII3 467 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 FAM160B2Q86V87 743 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 CHURC1Q8WUH1 139 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 ZNF576Q9H609 170 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
CSF3R-213ENST00000489551 TCF20Q9UGU0 1960 aaKnown RBP11.94□□□□□ -0.5
CSF3R-213ENST00000489551 KIAA1217Q5T5P2 1943 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 ERC2O15083 957 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 MX1P20591 662 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSF3R-213ENST00000489551 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 FBXO16Q8IX29 292 aaPredicted RBP11.94□□□□□ -0.5
CSF3R-213ENST00000489551 MORC4Q8TE76 937 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 TIFAQ96CG3 184 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 ANAPC4Q9UJX5 808 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 TRANK1O15050 2925 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
CSF3R-213ENST00000489551 ASB14A6NK59 587 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 TSPY2A6NKD2 308 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
CSF3R-213ENST00000489551 SLC16A2P36021 539 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 PSMC6P62333 389 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 IKQ13123 557 aaPredicted RBP11.93□□□□□ -0.5
CSF3R-213ENST00000489551 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 ADGRE1Q14246 886 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 FSCN1Q16658 493 aaKnown RBP11.93□□□□□ -0.5
CSF3R-213ENST00000489551 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 TRPV6Q9H1D0 765 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 WNT8AQ9H1J5 351 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
CSF3R-213ENST00000489551 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 ISY1Q9ULR0 285 aaKnown RBP11.93□□□□□ -0.5
CSF3R-213ENST00000489551 MTMR7Q9Y216 660 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
CSF3R-213ENST00000489551 TANC1Q9C0D5 1861 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 A0A0D9SFI3 127 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 RBAK-RBAKDNI3L0D1 243 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 NFIBO00712 420 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 ORC4O43929 436 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 B4GALT4O60513 344 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
CSF3R-213ENST00000489551 LRRFIP1Q32MZ4 808 aaKnown RBP11.92□□□□□ -0.5
CSF3R-213ENST00000489551 BTNL9Q6UXG8 535 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 NSMFQ6X4W1 530 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
CSF3R-213ENST00000489551 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 HERVK_113Q902F9 699 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
CSF3R-213ENST00000489551 PRDM12Q9H4Q4 367 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
CSF3R-213ENST00000489551 YBX2Q9Y2T7 364 aaKnown RBP11.92□□□□□ -0.5
CSF3R-213ENST00000489551 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
CSF3R-213ENST00000489551 RANBP6O60518 1105 aaKnown RBP11.91□□□□□ -0.5
CSF3R-213ENST00000489551 FGAP02671 866 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 ICAM1P05362 532 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 CCL23P55773 120 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 BAATQ14032 418 aaPredicted RBP11.91□□□□□ -0.5
CSF3R-213ENST00000489551 ALX1Q15699 326 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 IQSEC1Q6DN90 963 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 ZNF589Q86UQ0 364 aaPredicted RBP11.91□□□□□ -0.5
CSF3R-213ENST00000489551 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 CLEC4DQ8WXI8 215 aa11.91□□□□□ -0.5
CSF3R-213ENST00000489551 HIPK3Q9H422 1215 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms