RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SMTNL1A8MU46 457 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 BECN2A8MW95 431 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 PPIP5K2O43314 1243 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 NRDCO43847 1150 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 PRDM1O75626 825 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 MYL1P05976 194 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 RPS12P25398 132 aaKnown RBP7.26□□□□□ -1.25
SF3A3-208ENST00000489537 SYKP43405 635 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 TNNI2P48788 182 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 SCNN1DP51172 638 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 RBM5P52756 815 aaKnown RBP eCLIP7.26□□□□□ -1.25
SF3A3-208ENST00000489537 GABPAQ06546 454 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 TNFAIP1Q13829 316 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 COL9A3Q14050 684 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-208ENST00000489537 DACT2Q5SW24 774 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 KRT25Q7Z3Z0 450 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-208ENST00000489537 NIM1KQ8IY84 436 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 CCDC144CPQ8IYA2 1237 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 TRIML1Q8N9V2 468 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 JDP2Q8WYK2 163 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 SH2D4AQ9H788 454 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 MTMR4Q9NYA4 1195 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 NYAP2Q9P242 653 aa7.26□□□□□ -1.25
SF3A3-208ENST00000489537 LAMB1P07942 1786 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 PALM3A6NDB9 673 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 BTBD18B2RXH4 712 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 KLRF2D3W0D1 207 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 SLC26A4O43511 780 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 SMC2O95347 1197 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 PRKCSHP14314 528 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 RXRAP19793 462 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 MSNP26038 577 aaKnown RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 PRPHP41219 470 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 EPS15P42566 896 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 ZNF165P49910 485 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 GUCY1B3Q02153 619 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 CEBPZQ03701 1054 aaKnown RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 TYRO3Q06418 890 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 FAM47AQ5JRC9 791 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 MAP1SQ66K74 1059 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 APOBEC3HQ6NTF7 200 aaKnown RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 CDC42EP5Q6NZY7 148 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 TMEM179Q6ZVK1 233 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 GAS2L3Q86XJ1 694 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 BLIDQ8IZY5 108 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 FAM43AQ8N2R8 423 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 LARGE2Q8N3Y3 721 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 MTMR14Q8NCE2 650 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 ENGASEQ8NFI3 743 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 DCAF4Q8WV16 495 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 PGBD1Q96JS3 809 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 PDLIM2Q96JY6 352 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 GPR101Q96P66 508 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 TMEM47Q9BQJ4 181 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 BPIFA3Q9BQP9 254 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 MYL10Q9BUA6 226 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 RAB34Q9BZG1 259 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 MAGEF1Q9HAY2 307 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 BARHL2Q9NY43 387 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 PCDHA4Q9UN74 947 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 SRPRBQ9Y5M8 271 aaKnown RBP7.25□□□□□ -1.25
SF3A3-208ENST00000489537 CNTNAP5Q8WYK1 1306 aa7.25□□□□□ -1.25
SF3A3-208ENST00000489537 ATRNL1Q5VV63 1379 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 CYP2D7A0A087X1C5 515 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 TTC24A2A3L6 582 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 YDJCA8MPS7 323 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 TRAF5O00463 557 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 WDHD1O75717 1129 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 ZNF202O95125 648 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 PTMAP06454 111 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 VIL1P09327 827 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 LONP1P36776 959 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 PLCD1P51178 756 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 MRPL12P52815 198 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 PTPAQ15257 358 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 DLGAP5Q15398 846 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 PKN1Q16512 942 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 AOC3Q16853 763 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 CERKLQ49MI3 558 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 RESP18Q5W5W9 173 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 FAM173BQ6P4H8 233 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 RSBN1LQ6PCB5 846 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 FAM83AQ86UY5 434 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 METTL16Q86W50 562 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 FMR1NBQ8N0W7 255 aaPredicted RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 SRBD1Q8N5C6 995 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 MKL1Q969V6 931 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 CCDC47Q96A33 483 aaKnown RBP7.24□□□□□ -1.25
SF3A3-208ENST00000489537 AK8Q96MA6 479 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 FUCA2Q9BTY2 467 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 LRRC27Q9C0I9 530 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 ZMYND12Q9H0C1 365 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 RBSNQ9H1K0 784 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 CUEDC2Q9H467 287 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 RIOX1Q9H6W3 641 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 DBNDD1Q9H9R9 158 aa7.24□□□□□ -1.25
SF3A3-208ENST00000489537 SENP2Q9HC62 589 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms