RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 GPCPD1Q9NPB8 672 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 ANAPC4Q9UJX5 808 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 CCPG1Q9ULG6 757 aa15.81■□□□□ 0.12
LINC00173-204ENST00000489452 CDH23Q9H251 3354 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 A0A0D9SFI3 127 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 A0A0U1RQG5 324 aaPredicted RBP15.8■□□□□ 0.12
LINC00173-204ENST00000489452 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 CTAGE5O15320 804 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 ORC4O43929 436 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 PLA2G6O60733 806 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 CST5P28325 142 aaPredicted RBP15.8■□□□□ 0.12
LINC00173-204ENST00000489452 HAND2P61296 217 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 ALX1Q15699 326 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 MCMDC2Q4G0Z9 681 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 B4GALNT3Q6L9W6 998 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 CXCL17Q6UXB2 119 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC00173-204ENST00000489452 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 TBX21Q9UL17 535 aa15.8■□□□□ 0.12
LINC00173-204ENST00000489452 VCANP13611 3396 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 ASTN1O14525 1302 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-204ENST00000489452 ACRP10323 421 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 SMPD1P17405 629 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 NMIQ13287 307 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-204ENST00000489452 BAATQ14032 418 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-204ENST00000489452 MFSD5Q6N075 450 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 FBXO16Q8IX29 292 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-204ENST00000489452 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 RILPL2Q969X0 211 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.79■□□□□ 0.12
LINC00173-204ENST00000489452 LNPKQ9C0E8 428 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
LINC00173-204ENST00000489452 MROH7Q68CQ1 1323 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.78■□□□□ 0.12
LINC00173-204ENST00000489452 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.78■□□□□ 0.12
LINC00173-204ENST00000489452 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
LINC00173-204ENST00000489452 HSPD1P10809 573 aaKnown RBP15.78■□□□□ 0.12
LINC00173-204ENST00000489452 CSF2RAP15509 400 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 CYP2C18P33260 490 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 FSCN1Q16658 493 aaKnown RBP15.78■□□□□ 0.12
LINC00173-204ENST00000489452 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 KIAA1211Q6ZU35 1233 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 C16orf59Q7L2K0 433 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 TLK2Q86UE8 772 aa15.78■□□□□ 0.12
LINC00173-204ENST00000489452 MAFAQ8NHW3 353 aaPredicted RBP15.78■□□□□ 0.12
LINC00173-204ENST00000489452 GRXCR1A8MXD5 290 aa15.77■□□□□ 0.12
LINC00173-204ENST00000489452 ICAM1P05362 532 aa15.77■□□□□ 0.12
LINC00173-204ENST00000489452 FGRP09769 529 aa15.77■□□□□ 0.12
LINC00173-204ENST00000489452 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
LINC00173-204ENST00000489452 FOSL2P15408 326 aa15.77■□□□□ 0.12
LINC00173-204ENST00000489452 PPIGQ13427 754 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC00173-204ENST00000489452 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.12
LINC00173-204ENST00000489452 IQSEC1Q6DN90 963 aa15.77■□□□□ 0.12
LINC00173-204ENST00000489452 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.12
LINC00173-204ENST00000489452 ZNF589Q86UQ0 364 aaPredicted RBP15.77■□□□□ 0.12
LINC00173-204ENST00000489452 COL25A1Q9BXS0 654 aaPredicted RBP15.77■□□□□ 0.12
LINC00173-204ENST00000489452 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
LINC00173-204ENST00000489452 PTPDC1A2A3K4 754 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 NFIBO00712 420 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 DNAJB2P25686 324 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 NOVP48745 357 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 PSMC6P62333 389 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 ITGA7Q13683 1181 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 GRIN2CQ14957 1233 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 TMEM240Q5SV17 173 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 MFSD6Q6ZSS7 791 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 FAM126BQ8IXS8 530 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 TMEM199Q8N511 208 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
LINC00173-204ENST00000489452 TRPV6Q9H1D0 765 aa15.76■□□□□ 0.11
LINC00173-204ENST00000489452 RANBP17Q9H2T7 1088 aaKnown RBP15.76■□□□□ 0.11
LINC00173-204ENST00000489452 GRIN2DO15399 1336 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 ZEB2O60315 1214 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 CALML3P27482 149 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 ZKSCAN3Q9BRR0 538 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 MYO9BQ13459 2157 aa15.75■□□□□ 0.11
LINC00173-204ENST00000489452 CABYRO75952 493 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 CD4P01730 458 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 PBX2P40425 430 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 CCL23P55773 120 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 NKX3-2P78367 333 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 WDR11Q9BZH6 1224 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 VTA1Q9NP79 307 aa15.74■□□□□ 0.11
LINC00173-204ENST00000489452 ADD3Q9UEY8 706 aaKnown RBP15.74■□□□□ 0.11
LINC00173-204ENST00000489452 UMODL1Q5DID0 1318 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 GOLGA8HP0CJ92 632 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 PDHBP11177 359 aa15.73■□□□□ 0.11
LINC00173-204ENST00000489452 ALDH5A1P51649 535 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms