RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 APOBEC3HQ6NTF7 200 aaKnown RBP9.96□□□□□ -0.82
CSMD2-209ENST00000489419 ZDHHC15Q96MV8 337 aa9.96□□□□□ -0.82
CSMD2-209ENST00000489419 PANX2Q96RD6 677 aa9.96□□□□□ -0.82
CSMD2-209ENST00000489419 TMEM60Q9H2L4 133 aa9.96□□□□□ -0.82
CSMD2-209ENST00000489419 DHX36Q9H2U1 1008 aaKnown RBP9.96□□□□□ -0.82
CSMD2-209ENST00000489419 KBTBD4Q9NVX7 518 aa9.96□□□□□ -0.82
CSMD2-209ENST00000489419 LIMA1Q9UHB6 759 aaKnown RBP9.96□□□□□ -0.82
CSMD2-209ENST00000489419 H7C1D1 291 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 MMP10P09238 476 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 PBX1P40424 430 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 PPP1R2P41236 205 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 CDC42EP5Q6NZY7 148 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 TMEM139Q8IV31 216 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 REXO1Q8N1G1 1221 aaKnown RBP9.95□□□□□ -0.82
CSMD2-209ENST00000489419 ANKRD20A12PQ8NF67 263 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 PIGSQ96S52 555 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 NAA15Q9BXJ9 866 aaKnown RBP9.95□□□□□ -0.82
CSMD2-209ENST00000489419 DDX4Q9NQI0 724 aaKnown RBP9.95□□□□□ -0.82
CSMD2-209ENST00000489419 ITIH6Q6UXX5 1313 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 PNMA6FA0A0J9YX94 578 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 APBA3O96018 575 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 AKR1B1P15121 316 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 SHMT1P34896 483 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 ZNF543Q08ER8 600 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 PAK1Q13153 545 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 PICALMQ13492 652 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 KARSQ15046 597 aaKnown RBP9.95□□□□□ -0.82
CSMD2-209ENST00000489419 NAALADL2Q58DX5 795 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 STRIP1Q5VSL9 837 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 TC2NQ8N9U0 490 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 ANKRD7Q92527 254 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
CSMD2-209ENST00000489419 CCDC51Q96ER9 411 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 BAG1Q99933 345 aaPredicted RBP9.95□□□□□ -0.82
CSMD2-209ENST00000489419 GLT8D2Q9H1C3 349 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 MTMR7Q9Y216 660 aa9.95□□□□□ -0.82
CSMD2-209ENST00000489419 RHOBTB3O94955 611 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 CCDC172P0C7W6 258 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 CASP1P29466 404 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 ETF1P62495 437 aaKnown RBP9.94□□□□□ -0.82
CSMD2-209ENST00000489419 AMPD3Q01432 767 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 STIM1Q13586 685 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 KLHL10Q6JEL2 608 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 MKL1Q969V6 931 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 IDI2Q9BXS1 227 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 BLZF1Q9H2G9 400 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 CCDC66A2RUB6 948 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 AKR1B15C9JRZ8 316 aaPredicted RBP9.94□□□□□ -0.82
CSMD2-209ENST00000489419 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
CSMD2-209ENST00000489419 CRKP46108 304 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 ADCY7P51828 1080 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 PDIA5Q14554 519 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 CABP7Q86V35 215 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 PPFIBP1Q86W92 1011 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 HOMER1Q86YM7 354 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 ADSSL1Q8N142 457 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 ZNF710Q8N1W2 664 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 IGSF22Q8N9C0 903 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 NOC3LQ8WTT2 800 aaKnown RBP9.94□□□□□ -0.82
CSMD2-209ENST00000489419 STAMQ92783 540 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 MTMR8Q96EF0 704 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 NCAPGQ9BPX3 1015 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 C7orf25Q9BPX7 421 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 L2HGDHQ9H9P8 463 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 VAT1LQ9HCJ6 419 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 RIC8AQ9NPQ8 531 aa9.94□□□□□ -0.82
CSMD2-209ENST00000489419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSMD2-209ENST00000489419 F8W031 263 aaPredicted RBP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 H0YIN7 160 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 FXR2P51116 673 aaKnown RBP eCLIP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 STX17P56962 302 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 TRIM14Q14142 442 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 LETM2Q2VYF4 491 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 COBLL1Q53SF7 1204 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 ZNF771Q7L3S4 317 aaPredicted RBP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 REXO1L1PQ8IX06 675 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 TBCKQ8TEA7 893 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 NELFBQ8WX92 580 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 DHTKD1Q96HY7 919 aaPredicted RBP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 MTMR9Q96QG7 549 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 NAP1L4Q99733 375 aaKnown RBP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 CTNND2Q9UQB3 1225 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 PHLPP2Q6ZVD8 1323 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 KLRC4O43908 158 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 TPM1P09493 284 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 GIMAP8Q8ND71 665 aaPredicted RBP9.93□□□□□ -0.82
CSMD2-209ENST00000489419 CNKSR1Q969H4 720 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 CALML4Q96GE6 196 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 SGSM3Q96HU1 749 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 RAB34Q9BZG1 259 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 CPVLQ9H3G5 476 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 JMJD4Q9H9V9 463 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 NYAP2Q9P242 653 aa9.93□□□□□ -0.82
CSMD2-209ENST00000489419 PI4KBQ9UBF8 816 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms