RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 USP17L11C9JVI0 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L18D6R9N7 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L22D6RA61 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L17D6RBQ6 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L19D6RCP7 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L20D6RJB6 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 PLIN1O60240 522 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 SP9P0CG40 484 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 NKX3-2P78367 333 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L24Q0WX57 530 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 CATSPERGQ6ZRH7 1159 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 RIN2Q8WYP3 895 aaPredicted RBP9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 SUSD6Q92537 303 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
EXOSC3-206ENST00000489414 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 CABYRO75952 493 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 IGKV5-2P06315 115 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 IQCF3P0C7M6 154 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 CYP2C9P11712 490 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 CXCL17Q6UXB2 119 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 PDZD3Q86UT5 571 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 VPS37DQ86XT2 251 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 DDX1Q92499 740 aaKnown RBP9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 C12orf42Q96LP6 360 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 SIL1Q9H173 461 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 IGFLR1Q9H665 355 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 SPC25Q9HBM1 224 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 PARD6AQ9NPB6 346 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 CACNA1IQ9P0X4 2223 aa9.51□□□□□ -0.89
EXOSC3-206ENST00000489414 MICAL3Q7RTP6 2002 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 EIF4E1BA6NMX2 242 aaKnown RBP9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 ASNSP08243 561 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 JAG1P78504 1218 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 GLIS3Q8NEA6 775 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 SECISBP2LQ93073 1101 aaKnown RBP9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 SPATC1LQ9H0A9 340 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 TRMT13Q9NUP7 481 aaKnown RBP9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 INSL6Q9Y581 213 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 MYH13Q9UKX3 1938 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 MROH5Q6ZUA9 1318 aa9.5□□□□□ -0.89
EXOSC3-206ENST00000489414 H7C1W4 665 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 ARHGAP6O43182 974 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 HOXB7P09629 217 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 PLA2G2AP14555 144 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 ZNF792Q3KQV3 632 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 FBXO11Q86XK2 927 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 ZCCHC14Q8WYQ9 949 aaKnown RBP9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 MROH8Q9H579 483 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 PHAXQ9H814 394 aaKnown RBP9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 MBIPQ9NS73 344 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 ITPR3Q14573 2671 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 RELNP78509 3460 aa9.49□□□□□ -0.89
EXOSC3-206ENST00000489414 MYH2Q9UKX2 1941 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 FCER1AP12319 257 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 HTRA4P83105 476 aaPredicted RBP9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 SRSF1Q07955 248 aaKnown RBP eCLIP9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 PICALMQ13492 652 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 FAM117BQ6P1L5 589 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 TMEM192Q8IY95 271 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 GATA6Q92908 595 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 BORCS6Q96GS4 357 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 LMAN2LQ9H0V9 348 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 CFAP46Q8IYW2 2715 aa9.48□□□□□ -0.89
EXOSC3-206ENST00000489414 SIPA1L1O43166 1804 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 TRIP12Q14669 1992 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 SPTLC1O15269 473 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 PGK2P07205 417 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 VCAM1P19320 739 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 PRDX5P30044 214 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 BEX3Q00994 111 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 C19orf57Q0VDD7 668 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 IFIT5Q13325 482 aaKnown RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 GCKRQ14397 625 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 LSM14BQ9BX40 385 aaKnown RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 OCEL1Q9H607 264 aa9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 ZHX1Q9UKY1 873 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 BARX2Q9UMQ3 279 aaPredicted RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.47□□□□□ -0.89
EXOSC3-206ENST00000489414 COL12A1Q99715 3063 aa9.46□□□□□ -0.89
EXOSC3-206ENST00000489414 GLP2RO95838 553 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 CASP7P55210 303 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 PSMC6P62333 389 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 GPNMBQ14956 572 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 LDHAL6AQ6ZMR3 332 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 NCAPG2Q86XI2 1143 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 EFHBQ8N7U6 833 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 SMG5Q9UPR3 1016 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms