RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
UFD1-209ENST00000489406 POP1Q99575 1024 aaKnown RBP18.32■□□□□ 0.52
UFD1-209ENST00000489406 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
UFD1-209ENST00000489406 KMT2EQ8IZD2 1858 aa18.32■□□□□ 0.52
UFD1-209ENST00000489406 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 PROB1E7EW31 1015 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 DEFB103AP81534 67 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 FBXO22Q8NEZ5 403 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 CRBNQ96SW2 442 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 RAD9AQ99638 391 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 TEX13BQ9BXU2 312 aa18.31■□□□□ 0.52
UFD1-209ENST00000489406 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
UFD1-209ENST00000489406 MED19A0JLT2 244 aaPredicted RBP18.3■□□□□ 0.52
UFD1-209ENST00000489406 PRR23AA6NEV1 266 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 ICA1Q05084 483 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 CLUL1Q15846 466 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 TCEAL5Q5H9L2 206 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 ANKRD35Q8N283 1001 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
UFD1-209ENST00000489406 CLDND1Q9NY35 253 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 CTNNA3Q9UI47 895 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 SIP14410 1827 aa18.3■□□□□ 0.52
UFD1-209ENST00000489406 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
UFD1-209ENST00000489406 GJB5O95377 273 aa18.29■□□□□ 0.52
UFD1-209ENST00000489406 SMPD1P17405 629 aa18.29■□□□□ 0.52
UFD1-209ENST00000489406 SMAD2Q15796 467 aaKnown RBP18.29■□□□□ 0.52
UFD1-209ENST00000489406 TIGD5Q53EQ6 642 aa18.29■□□□□ 0.52
UFD1-209ENST00000489406 TTC39AQ5SRH9 613 aa18.29■□□□□ 0.52
UFD1-209ENST00000489406 FAM117BQ6P1L5 589 aa18.29■□□□□ 0.52
UFD1-209ENST00000489406 FSD1Q9BTV5 496 aa18.29■□□□□ 0.52
UFD1-209ENST00000489406 KMT2BQ9UMN6 2715 aaPredicted RBP18.29■□□□□ 0.52
UFD1-209ENST00000489406 RAD21O60216 631 aa18.28■□□□□ 0.52
UFD1-209ENST00000489406 PTPROQ16827 1216 aa18.28■□□□□ 0.52
UFD1-209ENST00000489406 FAM47CQ5HY64 1035 aa18.28■□□□□ 0.52
UFD1-209ENST00000489406 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
UFD1-209ENST00000489406 CPXCR1Q8N123 301 aa18.28■□□□□ 0.52
UFD1-209ENST00000489406 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
UFD1-209ENST00000489406 PITPNM1O00562 1244 aa18.27■□□□□ 0.52
UFD1-209ENST00000489406 AKR1B1P15121 316 aa18.27■□□□□ 0.52
UFD1-209ENST00000489406 AVPR2P30518 371 aa18.27■□□□□ 0.52
UFD1-209ENST00000489406 ZAP70P43403 619 aa18.27■□□□□ 0.52
UFD1-209ENST00000489406 ZXDAP98168 799 aa18.27■□□□□ 0.52
UFD1-209ENST00000489406 TMEM63BQ5T3F8 832 aa18.27■□□□□ 0.52
UFD1-209ENST00000489406 MBTPS2O43462 519 aa18.26■□□□□ 0.51
UFD1-209ENST00000489406 LTBRP36941 435 aa18.26■□□□□ 0.51
UFD1-209ENST00000489406 CNTN2Q02246 1040 aa18.26■□□□□ 0.51
UFD1-209ENST00000489406 COL19A1Q14993 1142 aa18.26■□□□□ 0.51
UFD1-209ENST00000489406 CERS3Q8IU89 383 aa18.26■□□□□ 0.51
UFD1-209ENST00000489406 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
UFD1-209ENST00000489406 TANC1Q9C0D5 1861 aa18.25■□□□□ 0.51
UFD1-209ENST00000489406 STXBP3O00186 592 aa18.25■□□□□ 0.51
UFD1-209ENST00000489406 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
UFD1-209ENST00000489406 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
UFD1-209ENST00000489406 RPAINQ86UA6 219 aa18.25■□□□□ 0.51
UFD1-209ENST00000489406 DDX49Q9Y6V7 483 aaKnown RBP18.25■□□□□ 0.51
UFD1-209ENST00000489406 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
UFD1-209ENST00000489406 BFSP2Q13515 415 aa18.24■□□□□ 0.51
UFD1-209ENST00000489406 CCDC158Q5M9N0 1113 aa18.24■□□□□ 0.51
UFD1-209ENST00000489406 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
UFD1-209ENST00000489406 NSUN3Q9H649 340 aaKnown RBP18.24■□□□□ 0.51
UFD1-209ENST00000489406 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
UFD1-209ENST00000489406 GVINP1Q7Z2Y8 2422 aa18.24■□□□□ 0.51
UFD1-209ENST00000489406 DMDP11532 3685 aa18.24■□□□□ 0.51
UFD1-209ENST00000489406 IGSF3O75054 1194 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 KDM4AO75164 1064 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 MYL3P08590 195 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 CYP2D6P10635 497 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 DLX2Q07687 328 aaPredicted RBP18.23■□□□□ 0.51
UFD1-209ENST00000489406 NBPF20Q3BBV1 942 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 DYNLL2Q96FJ2 89 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 CNTNAP3BQ96NU0 1288 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
UFD1-209ENST00000489406 CNTNAP3Q9BZ76 1288 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 RAVER2Q9HCJ3 691 aaKnown RBP18.23■□□□□ 0.51
UFD1-209ENST00000489406 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 HDAC5Q9UQL6 1122 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 Q9Y3F1 56 aa18.23■□□□□ 0.51
UFD1-209ENST00000489406 NCOR2Q9Y618 2525 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 RBAK-RBAKDNI3L0D1 243 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 PURAQ00577 322 aaKnown RBP18.22■□□□□ 0.51
UFD1-209ENST00000489406 GPM6BQ13491 265 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 GPNMBQ14956 572 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 TCTN1Q2MV58 587 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 EPC2Q52LR7 807 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 EEPD1Q7L9B9 569 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 ADSSL1Q8N142 457 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 SSH1Q8WYL5 1049 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 GOPCQ9HD26 462 aa18.22■□□□□ 0.51
UFD1-209ENST00000489406 CTDP1Q9Y5B0 961 aaPredicted RBP18.22■□□□□ 0.51
UFD1-209ENST00000489406 BAHCC1Q9P281 2608 aa18.21■□□□□ 0.51
UFD1-209ENST00000489406 NBL1P41271 181 aa18.21■□□□□ 0.51
UFD1-209ENST00000489406 LRRFIP1Q32MZ4 808 aaKnown RBP18.21■□□□□ 0.51
UFD1-209ENST00000489406 CNKSR3Q6P9H4 555 aa18.21■□□□□ 0.51
UFD1-209ENST00000489406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
UFD1-209ENST00000489406 SWAP70Q9UH65 585 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms