RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ANKRD13AQ8IZ07 590 aa6.26□□□□□ -1.41
XRN1-213ENST00000489241 C7orf61Q8IZ16 206 aa6.26□□□□□ -1.41
XRN1-213ENST00000489241 MICAL1Q8TDZ2 1067 aa6.26□□□□□ -1.41
XRN1-213ENST00000489241 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
XRN1-213ENST00000489241 PCDHB10Q9UN67 800 aa6.26□□□□□ -1.41
XRN1-213ENST00000489241 OR14I1A6ND48 311 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 NOTOA8MTQ0 251 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 C9IYK1 514 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 NRDCO43847 1150 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 SYPP08247 313 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 SLC14A2Q15849 920 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 NOL9Q5SY16 702 aaKnown RBP6.25□□□□□ -1.41
XRN1-213ENST00000489241 TDRD10Q5VZ19 366 aaKnown RBP6.25□□□□□ -1.41
XRN1-213ENST00000489241 HEATR6Q6AI08 1181 aaKnown RBP6.25□□□□□ -1.41
XRN1-213ENST00000489241 C6orf15Q6UXA7 325 aaPredicted RBP6.25□□□□□ -1.41
XRN1-213ENST00000489241 PPFIBP1Q86W92 1011 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 LILRB2Q8N423 598 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 DNAJC7Q99615 494 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 APBA2Q99767 749 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 PRR13Q9NZ81 148 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 RAPGEFL1Q9UHV5 662 aa6.25□□□□□ -1.41
XRN1-213ENST00000489241 FKTNO75072 461 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 CD247P20963 164 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 GALK1P51570 392 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 ZNF143P52747 638 aaPredicted RBP6.24□□□□□ -1.41
XRN1-213ENST00000489241 AXDND1Q5T1B0 1012 aaPredicted RBP6.24□□□□□ -1.41
XRN1-213ENST00000489241 ADGRF1Q5T601 910 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 CEP128Q6ZU80 1094 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 ADAT2Q7Z6V5 191 aaKnown RBP6.24□□□□□ -1.41
XRN1-213ENST00000489241 KLHL6Q8WZ60 621 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 HHIPL1Q96JK4 782 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 FCRL2Q96LA5 508 aaPredicted RBP6.24□□□□□ -1.41
XRN1-213ENST00000489241 PRDM14Q9GZV8 571 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 GBP3Q9H0R5 595 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 KANSL2Q9H9L4 492 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 CRTAC1Q9NQ79 661 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 CHST7Q9NS84 486 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 FAM86C1Q9NVL1 165 aa6.24□□□□□ -1.41
XRN1-213ENST00000489241 A0A087WZG4 1122 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 ANKRD34BA5PLL1 514 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 HRKO00198 91 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 PDPK1O15530 556 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 PPM1BO75688 479 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 GJB6O95452 261 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 EFEMP2O95967 443 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 ITGA4P13612 1032 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 ENDOUP21128 410 aaKnown RBP6.23□□□□□ -1.41
XRN1-213ENST00000489241 RASGRF1Q13972 1273 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 DCAF15Q66K64 600 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 TMEM132EQ6IEE7 984 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 TTLL10Q6ZVT0 673 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 EEPD1Q7L9B9 569 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 SH3TC2Q8TF17 1288 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 GPATCH3Q96I76 525 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 HAUS7Q99871 368 aa6.23□□□□□ -1.41
XRN1-213ENST00000489241 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 CLSTN1O94985 981 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 SIRT2Q8IXJ6 389 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 GP6Q9HCN6 339 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 GCM1Q9NP62 436 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 WHRNQ9P202 907 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 TNFRSF10DQ9UBN6 386 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 DIS3Q9Y2L1 958 aaKnown RBP6.22□□□□□ -1.41
XRN1-213ENST00000489241 SUGT1Q9Y2Z0 365 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
XRN1-213ENST00000489241 B2RBV5 119 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 RFXAPO00287 272 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 EPHX1P07099 455 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 INHBBP09529 407 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 IFRD2Q12894 506 aaPredicted RBP6.21□□□□□ -1.42
XRN1-213ENST00000489241 PLEKHG4Q58EX7 1191 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 LILRA6Q6PI73 481 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 ZPBP2Q6X784 338 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 SGPP1Q9BX95 441 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 KLHL25Q9H0H3 589 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 EPN3Q9H201 632 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 FANCLQ9NW38 375 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 GFOD1Q9NXC2 390 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 CNOT6Q9ULM6 557 aaKnown RBP6.21□□□□□ -1.42
XRN1-213ENST00000489241 MINPP1Q9UNW1 487 aa6.21□□□□□ -1.42
XRN1-213ENST00000489241 GPR55Q9Y2T6 319 aaPredicted RBP6.21□□□□□ -1.42
XRN1-213ENST00000489241 AGRPO00253 132 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 NOP56O00567 594 aaKnown RBP6.2□□□□□ -1.42
XRN1-213ENST00000489241 CBFA2T2O43439 604 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 SUSD5O60279 629 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 ZNF205O95201 554 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 PNLIPP16233 465 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 BMP8BP34820 402 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 RTP1P59025 263 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 SV2CQ496J9 727 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 ZNF385BQ569K4 471 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 CRACR2BQ8N4Y2 399 aaPredicted RBP6.2□□□□□ -1.42
XRN1-213ENST00000489241 ST13P5Q8NFI4 369 aaPredicted RBP6.2□□□□□ -1.42
XRN1-213ENST00000489241 FGD4Q96M96 766 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 PLCD4Q9BRC7 762 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 MBD1Q9UIS9 605 aaPredicted RBP6.2□□□□□ -1.42
XRN1-213ENST00000489241 SF3B6Q9Y3B4 125 aaKnown RBP6.2□□□□□ -1.42
XRN1-213ENST00000489241 FHOD1Q9Y613 1164 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms