RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 GRB14Q14449 540 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 RABEP1Q15276 862 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 CDC37Q16543 378 aaPredicted RBP14.42□□□□□ -0.1
COL4A5-206ENST00000489230 CPLX2Q6PUV4 134 aaKnown RBP14.42□□□□□ -0.1
COL4A5-206ENST00000489230 RASGRP2Q7LDG7 609 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 MCF2L2Q86YR7 1114 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 ANKRD35Q8N283 1001 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 SAMD3Q8N6K7 520 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 DPF3Q92784 378 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 MYL10Q9BUA6 226 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 RBM27Q9P2N5 1060 aaKnown RBP14.42□□□□□ -0.1
COL4A5-206ENST00000489230 DIS3Q9Y2L1 958 aaKnown RBP14.42□□□□□ -0.1
COL4A5-206ENST00000489230 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
COL4A5-206ENST00000489230 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
COL4A5-206ENST00000489230 ABCB11O95342 1321 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 HOXC6P09630 235 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 SNAP25P60880 206 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 TOB2Q14106 344 aaPredicted RBP14.41□□□□□ -0.1
COL4A5-206ENST00000489230 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 SLAIN1Q8ND83 568 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 USP6NLQ92738 828 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 RNF146Q9NTX7 359 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 MAP3K20Q9NYL2 800 aaKnown RBP14.41□□□□□ -0.1
COL4A5-206ENST00000489230 RLFQ13129 1914 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 PFASO15067 1338 aa14.41□□□□□ -0.1
COL4A5-206ENST00000489230 ADCY3O60266 1144 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 RXRAP19793 462 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 ADORA2AP29274 412 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 AKAP17AQ02040 695 aaKnown RBP14.4□□□□□ -0.1
COL4A5-206ENST00000489230 QRICH1Q2TAL8 776 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 SRBD1Q8N5C6 995 aaKnown RBP14.4□□□□□ -0.1
COL4A5-206ENST00000489230 TBC1D32Q96NH3 1257 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 PIGSQ96S52 555 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 CPVLQ9H3G5 476 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 GABRQQ9UN88 632 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
COL4A5-206ENST00000489230 B4DLN1 442 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 CPLX1O14810 134 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 CYTH3O43739 400 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 ST18O60284 1047 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 CYP2B6P20813 491 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 GRK4P32298 578 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
COL4A5-206ENST00000489230 AK2P54819 239 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 UBXN2AP68543 259 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 TEX2Q8IWB9 1127 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 MSL3Q8N5Y2 521 aaKnown RBP14.39□□□□□ -0.11
COL4A5-206ENST00000489230 APBA2Q99767 749 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 SLKQ9H2G2 1235 aaPredicted RBP14.39□□□□□ -0.11
COL4A5-206ENST00000489230 HOMER2Q9NSB8 354 aa14.39□□□□□ -0.11
COL4A5-206ENST00000489230 BIN2Q9UBW5 565 aaPredicted RBP14.39□□□□□ -0.11
COL4A5-206ENST00000489230 CDKL5O76039 1030 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 ADD1P35611 737 aaKnown RBP14.38□□□□□ -0.11
COL4A5-206ENST00000489230 MCM2P49736 904 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 MTFR1Q15390 333 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 USH1GQ495M9 461 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 OLFML2BQ68BL8 750 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 CCDC82Q8N4S0 544 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
COL4A5-206ENST00000489230 MPHOSPH6Q99547 160 aaKnown RBP14.38□□□□□ -0.11
COL4A5-206ENST00000489230 HTATIP2Q9BUP3 242 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 V9GY48 417 aaPredicted RBP14.38□□□□□ -0.11
COL4A5-206ENST00000489230 ZSWIM8A7E2V4 1837 aa14.38□□□□□ -0.11
COL4A5-206ENST00000489230 CEP290O15078 2479 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 NID2Q14112 1375 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 TRIOBPQ9H2D6 2365 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 hCG_1984214I3L0E3 225 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 PRPF3O43395 683 aaKnown RBP14.37□□□□□ -0.11
COL4A5-206ENST00000489230 PFKFB2O60825 505 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 IFNAR1P17181 557 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 CAPN2P17655 700 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
COL4A5-206ENST00000489230 ZNF792Q3KQV3 632 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
COL4A5-206ENST00000489230 RAB11FIP4Q86YS3 637 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 ZNF713Q8N859 430 aaPredicted RBP14.37□□□□□ -0.11
COL4A5-206ENST00000489230 KIF2CQ99661 725 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 GLT8D2Q9H1C3 349 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 FAM217BQ9NTX9 383 aaPredicted RBP14.37□□□□□ -0.11
COL4A5-206ENST00000489230 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
COL4A5-206ENST00000489230 ADD3Q9UEY8 706 aaKnown RBP14.37□□□□□ -0.11
COL4A5-206ENST00000489230 DNAJC25-GNG10A0A024R161 153 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 COBLO75128 1261 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 HMGCRP04035 888 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 CDC27P30260 824 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 CCT2P78371 535 aaKnown RBP14.36□□□□□ -0.11
COL4A5-206ENST00000489230 SSRP1Q08945 709 aaKnown RBP14.36□□□□□ -0.11
COL4A5-206ENST00000489230 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms